Shewanella loihica: Shew_2076
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Entry
Shew_2076 CDS
T00489
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
slo
Shewanella loihica
Pathway
slo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shew_2076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slo03400
]
Shew_2076
DNA repair and recombination proteins [BR:
slo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shew_2076
RecFOR pathway proteins
Shew_2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Transposase_20
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABO23942
UniProt:
A3QEP4
LinkDB
All DBs
Position
complement(2400643..2401260)
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AA seq
205 aa
AA seq
DB search
MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPELNQEAVIYTHFVVREDAQLL
YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT
AERLLVEMRDKLKSLMEASHGNEREFVLQSNYTPAPVVNTAEEDAISALLALGYKPAQAS
KAVSSVFEEGMDSETLIKASLKSML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggtcgtttacggggattactcgtcgagaagcaggcgcccgaggtgctgattgaa
actggcggtgtcggctatgaggtgcagatgccgctcaccagtttttacgaattgccagaa
ttaaaccaagaggcggtgatctacacccacttcgtggtgcgtgaagatgcccagctgctg
tacggtttcatcaccaagcaggagagggcgctgttcaggctgctgatcaagaccaatggc
gtcggtcctaagctggcactgaccatactctctggcatgacggcgggcgaatttgtgaaa
tgcgtcgagcatgacgatatcgcaaccctggttaagctgccgggtgtcggcaagaagact
gcggagcgtctgttggttgagatgcgcgacaagcttaagagcctgatggaagcgtcccat
ggcaacgagcgcgagtttgtgttgcagtctaactatactcctgcgcctgtggttaacact
gccgaagaagatgccatctcggcgcttttggcgttaggatataagccggcacaggccagt
aaggcggtgtccagtgtcttcgaagagggcatggattcagaaaccttgatcaaggcatcg
ctgaaatcgatgctctag
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