Shewanella loihica: Shew_2079
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Entry
Shew_2079 CDS
T00489
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
slo
Shewanella loihica
Pathway
slo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shew_2079
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slo01007
]
Shew_2079
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slo03016
]
Shew_2079
03029 Mitochondrial biogenesis [BR:
slo03029
]
Shew_2079
Enzymes [BR:
slo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Shew_2079
Amino acid related enzymes [BR:
slo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Shew_2079
Transfer RNA biogenesis [BR:
slo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Shew_2079
Prokaryotic type
Other AARSs
Shew_2079
Mitochondrial biogenesis [BR:
slo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Shew_2079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ABO23945
UniProt:
A3QEP7
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All DBs
Position
complement(2402603..2404381)
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AA seq
592 aa
AA seq
DB search
MRSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDLPEVFDVA
STLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTE
EQRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSAQVMDKTEEMVRGLFKELLNVDLGEFPKMTFAEAMRRYGSDKPDLRNPLELVDVADL
VKDVDFKVFQEPANDSEGRVAVLCVPGGASLSRKQLDEYGKYVNIYGAKGLAWMKVNELE
NGLEGIQSPVLKFLSEEVVKGILERTGAANGDLILFGADKANIVAEAMGALRLKVGEDFD
LLQGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSGITPAELEADPTAAISDAYDMVLN
GCELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYGTPPHAGLAFGLDRMV
MLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLEELGVSVVEAKKEQE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgttaatcggtctcatgttggggaagaagttactctc
gtaggttgggtaaaccgcagtcgcgatctcggcggcgtggtttttctggatttgcgcgac
cgtgaaggcgtgattcaggtagtatatgatcctgatctgccagaggtattcgatgtcgcc
agcacactgcgcagcgagttctgtgttcaggttaaaggcctggtacgcgcgcgtcccgac
agccagatcaacgatcagatgcgcacaggtgagattgaggtgctgggtaaggccctgacc
attctcaacagcgcaccggcactgccgatcaacatggacaaaaatcaacacaacaccgaa
gagcagcgtcttaagtatcgctacctggatctgcgtcgcccagagatggccgagcgcatc
atcttccgctctaaggtgaccagcgccgtgcgtcgtttcctcgacggtaacggcttcctc
gatatcgagaccccaattctgaccaaggcaaccccagaaggtgccagggactatctggtg
cctagccgtacctacaagggccagttcttcgcgctgccacaatcaccacagctgtttaaa
cagctgctgatgatgtctggcttcgaccgttactaccagatcgtgaaatgtttccgcgac
gaagacttacgcgccgaccgtcagcctgaatttacccagatcgatatcgaaacctctttc
atgacctcagcgcaggtgatggacaagactgaagagatggtacgcggcctgtttaaagag
ctgctgaacgtcgacctgggcgagttccctaagatgactttcgccgaagcgatgcgccgt
tacggctcagacaaaccagatctgcgtaacccgctggagctggtcgatgtagccgacctg
gttaaagatgtcgacttcaaggtgttccaggagccagccaacgacagtgaaggccgtgtt
gccgtgctgtgtgtgccgggcggcgctagcctgtcacgtaagcagctcgatgagtatggc
aagtatgtcaacatctatggcgccaaaggcttggcgtggatgaaggtcaacgagctggag
aacggcctggaaggcattcagtcaccagtgcttaagttcttaagcgaagaggtggttaag
gggatcctggagcgcacaggtgcggccaacggtgacctaatcctgttcggtgccgacaag
gcgaacatagtagccgaagccatgggcgcgctgcgtctcaaggtaggtgaagatttcgat
ctgcttcaaggcgactggaaaccgctatgggtggttgacttcccaatgttcgagcgcacc
tctgacggtggcctgcatgccatgcaccacccgttcactgcgccgagtggtatcacgcca
gccgagctggaagcggatccaacggcggccatctctgacgcctatgacatggtacttaac
ggttgtgaactgggcggtggctcggtacgtatctacgacgccgagatgcagtcggccgtg
ttcagaatcctggggattaacgatgaggaagcccaagagaagtttggcttcctgctagag
gccctcaagtatggtacgccgccacacgcaggtttggcattcggcctcgaccgtatggtg
atgctgatgacaggtgccagctcgattcgcgacgtgatggctttccctaagaccaccacg
gcagcctgtccgctcaccaacgcccctggctttgctaacccggtacagctcgaggagctt
ggggtgagtgtagtggaagcgaaaaaagagcaggaatag
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