Shewanella loihica: Shew_2096
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Entry
Shew_2096 CDS
T00489
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
slo
Shewanella loihica
Pathway
slo00730
Thiamine metabolism
slo01100
Metabolic pathways
slo01240
Biosynthesis of cofactors
Module
slo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Shew_2096
Enzymes [BR:
slo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Shew_2096
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABO23962
UniProt:
A3QER4
LinkDB
All DBs
Position
complement(2422909..2424960)
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AA seq
683 aa
AA seq
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MSTRREMRAEAQAFIDNLKPLQHPNSQKFYLNGSRPDLKVAMRQIYQSDTLIGGTAEAPV
YEKNPPITVYDCAGPYSDPEADIDVRRGLVKLRSEWIAERSDTQELEQVSSGFTQQRLAD
EGLDHLRFEQLPKPRRALEGRVVTQMHYARRGIITPEMEYVALRENMARETVTEEVLNQR
APGESFGAKLGEPITPEFVRQELAAGRAILPLNINHPEAEPMIIGRNFLVKVNANIGNSA
VTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVN
GIAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCL
SHHKENFLYEHFDEICQLCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKKAW
QYDVQTIIEGPGHIPMQLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM
IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAGDVAKGHPGAQIRDNALSKAR
FEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQEVREYAAAQ
ATDVREIEVEQIDVTASAPKADIQQGMAQMSAQFKQSGSELYHSAIRQSPGVESTSLEST
SLESTVLESTSLESTALEKAKEV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacgtcgtgaaatgcgagcagaggcccaggcctttattgataacctcaaaccc
ttacaacaccctaattcgcaaaaattttacctaaacggcagcaggccggatctcaaggtc
gccatgcggcagatctatcagtcagacaccctgattggcggcacggccgaggcgcctgtc
tatgagaagaatccccccatcacagtctatgactgcgccgggccctattcagatcccgag
gccgatatcgatgtgcgtcgtggtcttgttaagctgcgtagcgagtggatcgccgagcgc
agcgatacccaggaacttgagcaggtaagctcaggttttacccagcagcgtctggccgat
gaggggctagatcatctgaggtttgagcaactgcccaagccaagacgcgcccttgaaggc
agggtagtgactcagatgcactacgccagacgcggtatcatcaccccagagatggagtat
gtggccctgcgtgagaatatggctcgcgagacagtgaccgaagaggtgctcaatcagcgc
gcgccgggtgagagtttcggtgccaagctaggtgagccgatcacgccggagtttgtgcgt
caggagctggcggcgggccgggcaatcttaccgcttaacataaaccaccccgaggccgaa
cctatgatcatcggccgaaacttcctggtgaaggtcaacgccaacataggcaactcggcg
gtcacctcatctatcgaagaggaggtggagaagctggtgtgggccacccgttggggcgcg
gataccgtgatggacctctcgaccggccgttatatccacgagacccgcgagtggatcata
cgtaactcgccggtgccaatagggactgtgcccatctatcaggcgctggagaaggtcaat
ggcatcgccgaagatctcacctgggagatcttcagagataccctgatcgagcaggcggag
cagggggtggattactttaccattcacgccggcgtgcttctgcgttatgtgcccatgacg
gccaaacgcctcactggtattgtctcccgtggcggctccatcatggccaagtggtgtctc
tctcatcacaaggaaaatttcctctatgagcactttgatgagatctgtcagctgtgcgcg
gcctatgacgtctccctctcgctgggtgatggcatgcgtccaggctccatcgccgatgcc
aacgacgaggcgcagtttgccgagctggaaaccttaggcgagctggttaagaaggcctgg
cagtatgacgtgcagaccatcatcgaagggccgggtcatatcccgatgcagcttatcaag
gagaacatggataagcagctcgagctgtgtgacgaggcaccgttttataccctaggccct
cagaccaccgacattgctccaggttatgatcacttcacctcaggcataggggcggcgatg
atcgcctggtatggctgcgcaatgctctgctacgtaacgcccaaggaacatcttggtctg
ccaaacaaggaagacgtaaagcaagggctgatcgcctataagattgccgcccatgccggc
gatgtcgccaaggggcatcctggcgcgcagatccgcgacaacgccttgtctaaggcgagg
ttcgagttccgctgggaagatcaatacaacctggggctggatcccgataccgccagggcg
tatcacgacgaatcacttccgcaggagtcggccaaggtcgcgcatttctgctccatgtgc
ggtcccaagttctgctcgatgaagatcacccaagaggtgcgcgaatacgctgcggcccaa
gcgaccgatgtaagggagattgaggttgagcagattgacgttactgctagcgcgccgaag
gcagatattcaacaagggatggcgcagatgtcggcgcagtttaagcaaagtggtagcgag
ctctatcacagtgcgataagacaaagccctggcgttgaaagcacctctctcgaaagcacc
tctctcgaaagtaccgttcttgaaagtacttctcttgaaagtacggctctcgaaaaagca
aaagaggtgtag
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