KEGG   Shewanella loihica: Shew_2100
Entry
Shew_2100         CDS       T00489                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slo03400]
    Shew_2100
Enzymes [BR:slo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Shew_2100
DNA repair and recombination proteins [BR:slo03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Shew_2100
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 T2SSK
Other DBs
NCBI-ProteinID: ABO23966
UniProt: A3QER8
LinkDB
Position
complement(2428211..2431447)
AA seq 1078 aa
MYAELQYAELHVLSNYSFLRGASHPHELVEQAKRLGYQALALTDECSFAGVVKAHEAAKR
CDLKLILGAEFHLDEGLFVLLAPCRFAYGEISALITNARRSQGKGEYRVSLEAILAQQQS
LLLWRPPSLAQFRQAGEARRDEARSDDARSDLAVNDTAESEMAGGDTAKGSAAQSDEPNL
LSRYRDHIASIASRLVVAFPDRLHLLMERLLLPGEALNLQQWQWLSQTQKVPCVAAGGVR
MHEAERQPLLDILTCIAHGRDLDSGVALCSINAEASLKPIAAQRKRYPQEWIDNGLALAR
RCHFSLDELKYEYPAEVVPAGMQASDYLAQAVREGARRRFPDGVPDRVKAQYEKELELIA
AMAYEYFFLTIYDIVCFAKSQQILYQGRGSAANSVVCYCLGITEVDPTKINMLFERFISK
ERNEPPDIDVDFEHERREEVIQYIYRKYGRDRTALAAAVICYRFKSAMGDVGKALGIDAE
QVALMIKNIDRRDPKHHWTTQLAAMLPEAGRGRMLLPLVQTLIGFPRHLSQHVGGFIISA
GPLSELVPIENAAMADRTVIQWDKDDLESLGLLKVDILALGMLTAIRKTFTLLSLPEKAF
SMADVAWEEAEVYRMLQAGDSIGVFQVESRAQSAMLPRLKPACYYDLVVQIAIVRPGPIQ
GDMVHPYLRRRDGLEAVEYPSPAVESVLSRTMGVPIFQEQVIQLAMVAAGFSGGEADQLR
RAMASWKRTGELEKFEAKLLQGMAARGYSQTFAEQIYRQIKGFGEYGFPESHSASFALLA
YVSAYLKHHYPAAFCCALLNSQPMGFYSPSQLIQDVQRHDVMVLPVCVNHSDWDNSLVPL
LEAEQPAIRLGFRQVKGLRLEEIKTLIAARPEGGFTRVEQLYELGLSQGCLTLLASADAL
LTLAGHRYQARWQLSAYQPSLPLFDDLPAVASEVVLAPPSEMAAMQSDYRHLGLSLGRHV
MAQLRGLAPFVGCRHASELADCRHGQLVHVAGVVVGRQRPGTASGVTFVTLEDETGNINV
IVWSATARAQRQPFLTSKILKVTGVLETQSGVSHVIAGRLEDLSTLVNDFELSSRDFR
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgtacgctgaattacagtacgccgagttgcacgtcctctcgaactacagcttcttgcga
ggggcttcccatcctcacgagctggtggagcaggccaagcgccttggttatcaggcattg
gcgctgaccgacgaatgctcctttgccggtgtggtcaaggcccatgaggcggccaagcgc
tgcgatcttaaactgatcctgggcgccgagtttcatctcgatgaggggctgtttgtgctg
ctggcgccttgccgtttcgcctatggtgagatcagcgccctgatcaccaacgccaggcga
agccagggcaagggtgagtacagggtgagcctggaggccatcttggctcagcagcagagc
ctgctgctgtggcgcccgccctcgctggcgcagttcaggcaggctggcgaggcaaggaga
gatgaggcaaggagtgatgatgcaaggagtgacttggccgtaaacgatacggcagagagt
gagatggctgggggcgatacggcaaaggggagtgcggcacaaagcgatgagcctaatctg
ttgtcccgttatcgtgaccacatagcgagcattgcctcacggctagttgtagcctttccg
gatcgtctgcatcttttgatggagcggctcttgctaccgggagaggcccttaacttgcaa
cagtggcaatggctgagtcagactcagaaggtcccctgtgtggcggccggtggcgtgcgc
atgcacgaggcggagcgtcagccgctgctggatattttaacttgtatcgcccatgggcgg
gacctcgacagcggcgtggcgctatgctccatcaacgccgaagctagcctcaagccgatt
gcggcgcagcgtaaacgttatcctcaggagtggatcgataacggcctggctctggcccgt
cgctgccatttctctttggatgagctcaagtatgagtacccggccgaggtggtacccgcc
ggcatgcaggccagcgattatctggcgcaggcggtgcgtgaaggcgccagacgccgcttt
cccgatggagtgcccgatagggtgaaggcgcagtatgagaaggagctagagctgatcgcg
gcgatggcctatgagtatttctttctgaccatctatgacatcgtctgtttcgccaagtct
cagcagatcctctatcagggaaggggctcggcggccaactctgtggtctgttattgcctg
gggatcacagaggtggatcccactaagatcaacatgttgttcgaacgtttcatctccaag
gagcgcaacgagccgccggatatcgacgtggacttcgagcatgagcggcgcgaggaggtg
attcagtatatctatcgcaaatatggccgtgaccgcacggcgctggccgcggcggtgatc
tgttatcgcttcaagagtgccatgggcgatgtgggcaaggcgctggggatagatgccgag
caggtagccctgatgattaaaaatatcgatcgccgggatcccaagcatcactggacgact
cagcttgccgccatgttgccagaggctgggcgcgggcgcatgttgctgcccttggtgcag
acgctgatcggttttccccgccacctgtcccagcacgtgggaggctttatcatctccgca
gggcccttgtctgagctggtacccattgaaaatgcggccatggcggatcgcaccgtgatc
cagtgggataaggatgacctggagagcctggggctgttaaaggtggatatcctggccctg
gggatgctgacggcgatccgtaagaccttcaccttactgagtctcccagagaaagctttt
tccatggccgatgtggcatgggaggaggccgaggtctatcgcatgttgcaggcaggcgac
agcataggggtgtttcaggtcgagtcccgggcgcagagcgccatgctgccaaggctgaag
ccagcttgctattacgatctggtggtgcagatcgccattgttaggccagggccaattcag
ggggacatggtacatccctatctgaggcggcgggatggcctggaggcggtggaatatccc
agcccggcggtcgagtccgtgctgtcccgtaccatgggggtacctatctttcaggagcag
gtgatccagctggccatggtggccgcgggcttcagtggcggcgaggcggatcagctgcgc
cgagcgatggcgagctggaagcgtaccggtgagcttgaaaagtttgaggctaaactgctc
caggggatggcggcgcgggggtacagccaaacattcgccgagcagatctacaggcagatc
aaaggctttggcgagtatggctttcccgagtctcactccgccagctttgccctgttggcc
tatgtgtcggcctatcttaaacatcattatccggcggccttctgctgcgccttgcttaac
agtcaacccatgggcttctatagcccgtcgcagcttattcaggatgtgcagcgtcacgat
gttatggtactgccggtatgtgtcaatcacagtgactgggataatagcctggtgcccctg
ctggaggctgagcagcctgcgatacgtctgggctttaggcaagtgaagggactcaggctg
gaggagatcaagacccttatcgcggcgcgccccgaaggcggctttacccgggtcgagcag
ctctatgagctaggtttatctcagggctgtttgaccctgctggccagcgccgatgccctg
ttgacgctggccgggcataggtatcaggcgcgctggcaactcagtgcctatcagccgagc
cttccgctgttcgatgacttgccagctgtcgccagtgaggtggtgttggcgcccccaagt
gagatggcggccatgcagagcgactatcgccatctagggctcagcctggggcgccatgtt
atggctcaacttagagggctggcgccatttgtgggttgtcgccacgccagtgagttagcc
gattgtcgtcatgggcagcttgtgcatgtggcgggcgtggtggtggggcgtcagcgcccc
ggtaccgcctccggggttaccttcgtgaccttagaagatgagacgggcaacatcaatgtg
atcgtctggagcgccacggccagggcgcagcgacagccatttttaacatcaaaaatttta
aaggtaactggggtgcttgagacccagtctggtgtgtcacacgttatcgcgggcaggctg
gaggatttatcgactctggtgaatgattttgaactaagttcgcgggattttcgttag

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