Shewanella loihica: Shew_2174
Help
Entry
Shew_2174 CDS
T00489
Name
(GenBank) transcriptional regulator, GntR family
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slo03000
]
Shew_2174
Transcription factors [BR:
slo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Shew_2174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FadR_C
GntR
HTH_Crp_2
FCD
TrmB
HTH_24
HTH_IclR
Fe_dep_repress
PaaX
Rrf2
HVO_A0261_N
MarR_2
LexA_DNA_bind
MarR
Motif
Other DBs
NCBI-ProteinID:
ABO24040
UniProt:
A3QEZ2
LinkDB
All DBs
Position
complement(2533507..2534268)
Genome browser
AA seq
253 aa
AA seq
DB search
MTTVPQVPVAPKDKDIIEAKGPASFAEKYIVRSIWEGKFPPGSILPAERELSELIGVTRT
TLREVLQRLARDGWLTIQHGKPTRVNDIWETSGLNVLETIADLNPAGEPVLLEQLLSART
NISAIYFKGAVRYNPDKVLEALAPLATLKDDAKAFIEFDYQLHHTLAYHSGNPLYVLILN
GFKGLYSRVGEEYFAIEKARELALDFYQALEALAKDHNHNDVPVLMRSYGINSGKVWQRY
KANLMQSAEASKA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgtcccccaagtacctgtagcgcctaaagacaaagatattattgaagcgaaa
ggtcctgcgagctttgccgaaaagtatattgttcgttcgatttgggagggaaagtttcca
cccggttccattcttcctgccgagcgagaactgtctgaactgattggcgtgacacgtacg
acgctgcgtgaagtgctgcagcgcctcgcccgtgacggctggttgaccattcaacacggt
aagccgacacgagttaacgatatctgggaaacctcgggtctgaacgtgctggaaaccatc
gccgatcttaaccctgccggtgaacctgtgctgctggagcagcttttatctgcccgcacc
aacatcagtgccatctattttaagggcgccgtgcgttacaacccagacaaggtgcttgag
gcgttagcgccactggccaccctgaaagatgatgccaaggcttttatcgagttcgattac
caactgcatcacaccctggcgtaccattccggtaaccctctgtatgtgttgatcctcaac
ggtttcaagggcctctatagccgtgtgggtgaagagtactttgccattgagaaggcccgt
gagctggcgctggacttctatcaggcgctcgaagccctggccaaagatcacaaccacaac
gacgtgcctgtattgatgcgtagctacggcatcaacagcggcaaggtgtggcagcgttac
aaggcgaatctgatgcagtcggccgaggcgagcaaggcttaa
DBGET
integrated database retrieval system
