KEGG   Shewanella loihica: Shew_2196
Entry
Shew_2196         CDS       T00489                                 
Name
(GenBank) helicase c2
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slo03400]
    Shew_2196
Enzymes [BR:slo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Shew_2196
DNA repair and recombination proteins [BR:slo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Shew_2196
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: ABO24062
UniProt: A3QF14
LinkDB
Position
complement(2555180..2557105)
AA seq 641 aa
MNIRLTQDVQQVFAPDGSLSRHIKGYSCRVQQQTMATRVSETLQKGDNLVVEAGTGVGKT
YAYLVPALLSGKQVIVSTGSKNLQEQLFFKDLPALLNILGIRPKVALLKGRSNYLCQYLM
EKQLSGVEVNDGKILDDLLRIDQWASQTVDGDIGSLYAVPENSPAIPLVVSSKESCIGKA
CDHYEACFTRKARAKALDAKIIVVNHHLFFADRILKETGFAELLPDSDVVIFDEAHLLPD
IAVTYFGQQLSIKSLIRLLERFNELYRTQMADSPQIGAMTARCHTQLLHWQGLLFATEER
DWRRLIGDKALMEASWALVSELTAYRTMLLGYLGRNEAFDDGVEKIDGLLSKLTVFIQCD
NPDSAYSIDYGYQHLTLRISPIKVAKECQSLFSPDVSWIFTSATLQINRDLSLFTKAMGL
EKANTSILDSPFDYRRQSLFCVPRHLASVTSQERAARQLVEVAVKAINAAKGRTFMLFTS
HRMLNLVAVMLQGRIDYPLLVQGQAGKQTLLKKYRQLGNAVLLGTGAFWEGVDVRGKLLS
CVIIDKLPFVSPDDNLYKARADGVQREGKDPFMTLSLPQAVIALNQGVGRLIRDEKDRGV
LILCDNRIVNRPYGQAFINSLPPMHRTRDLDSAVHFLQTID
NT seq 1926 nt   +upstreamnt  +downstreamnt
ttgaatatacgactgacccaagatgtacagcaggtattcgccccagatggcagcttaagc
cgtcatatcaagggctatagctgtcgtgtccagcagcagacgatggcgactcgggtgagc
gagaccctgcaaaagggcgacaacctggtggtcgaggcaggcaccggcgtgggcaagacc
tacgcctatctggtgccggcgctgctcagcggtaagcaggtcatcgtcagcaccggcagt
aaaaacctgcaggagcagttgtttttcaaagatctgcccgcactgctcaacatcttaggg
atcaggccaaaagtggctctgctcaaggggcgcagcaactacctgtgccaatacctgatg
gagaagcagctcagcggcgtcgaggtgaacgatggcaagatcctcgatgacctgctgcga
atcgatcagtgggccagccagacggtggatggcgacatcggcagtctctacgccgtgccg
gaaaactccccggcgatcccgctggtggtgagcagtaaagagtcctgcattggcaaggcc
tgcgatcactatgaggcctgctttacccgtaaggcccgcgccaaggcgctcgatgccaaa
atcatagtggtcaaccatcacctgtttttcgccgatcgcatcctaaaagagacgggattt
gccgagctgttacccgacagcgacgtggtgatcttcgatgaggcgcatctgctgccagat
atcgccgtgacctatttcggccagcagctcagcatcaagagcctcatccgcctgctggaa
cgttttaacgaactctatcgcactcagatggcagattcgccgcagattggcgccatgacg
gcccgctgccatactcagctgctccattggcagggactgctgtttgccaccgaggagcgt
gactggcgaaggcttatcggcgacaaggccttgatggaggcatcatgggcactggtgtcc
gagctgaccgcctatcgcaccatgctgctgggctatcttggccgcaacgaggcgttcgat
gatggcgtcgaaaaaatcgatgggctgctcagcaagttaaccgtgtttattcaatgcgat
aacccagatagcgcctacagcatagactatggttatcagcacctgaccttgaggatctcg
cccatcaaggtggccaaagagtgtcagtcgctgtttagcccggatgtcagctggatcttt
acctcggccactttgcagatcaatcgcgacctgtcgctgtttaccaaggcgatggggctg
gagaaggccaacacgagtatattagacagccccttcgactatcggcgccaatctctgttc
tgtgtgccgcgccatctggcgtcggtcaccagtcaggagcgcgccgccaggcagctggtg
gaggtggcggtgaaggcgataaatgccgccaaggggcgtaccttcatgctgtttactagc
catcgcatgctcaatctggtggctgtgatgttacaggggcggatcgattatccgcttctg
gtgcagggacaggcgggcaagcagactttacttaagaagtaccgacagctgggtaacgcc
gtgttgctgggcacgggtgccttctgggagggggtggatgtacgcggtaagctgctgagc
tgcgtcatcatcgacaagctgcccttcgtctcgccggacgataacctctacaaggccagg
gctgacggggtgcagcgtgagggcaaagatcccttcatgaccctgtcgctgccccaggcg
gtgatagcgcttaaccagggcgtcggccgcctgattcgtgatgagaaagacaggggcgtg
ttgatcctgtgcgacaatcgcatcgtcaatcgcccctatggtcaggcctttatcaactcg
ctgccgcccatgcatcgcacccgggatctcgacagtgcggtgcatttcctgcaaaccata
gactag

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