Shewanella loihica: Shew_2213
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Entry
Shew_2213 CDS
T00489
Name
(GenBank) lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
KO
K02560
lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:
2.3.1.243
]
Organism
slo
Shewanella loihica
Pathway
slo00540
Lipopolysaccharide biosynthesis
slo01100
Metabolic pathways
Module
slo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Shew_2213
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Shew_2213
Enzymes [BR:
slo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.243 acyl-Kdo2-lipid IVA acyltransferase
Shew_2213
Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Lipid A
Shew_2213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lip_A_acyltrans
Motif
Other DBs
NCBI-ProteinID:
ABO24079
UniProt:
A3QF31
LinkDB
All DBs
Position
complement(2582237..2583172)
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AA seq
311 aa
AA seq
DB search
MSRKPKYFDRRFRAELLHPKHWPTWFAIGVLVFFGLMPAWLRDPIARLLARLVKKIAKKP
LKVARANLETCFPDKSKAEIDKLLDENIESFVLILLAQSELLLRSDANLRRRVQLDGFEH
VQRARDAGQPVIFIMPHVWGIEYAGLRLNLELPMVTMAKAHRNKLFDWFNNRMRSSKGGN
VYMREAGIRALLSELKNDNSFFYLPDEDLGPEKSVFAPFLGTVKATLPVVGRLASAGNAQ
VMPVKIGYDQQKRQYLLTVLPPISPEEMQGKENEALALNRAVEQVINAYPEQYMWFLKLL
RTRPPGEASLY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgtctagaaaacctaagtatttcgatcgccgctttcgcgccgagttattacatcctaag
cattggcccacctggtttgctataggggtgctggtgtttttcggcctgatgcccgcctgg
ctaagggatccgatagcgcgcctgcttgcgcgtctggtgaagaagatcgccaagaagcct
ctcaaggtggctagggcaaacctggagacctgtttcccggataaatcaaaggctgagatc
gataagctactcgatgagaatatcgagagttttgtattgatcctgttggcgcagtcagag
ctgttgctgcgctcagatgctaatctgcgtcgccgcgtccagcttgacggcttcgagcat
gtgcagcgcgctcgtgatgccggtcagccggtgatcttcatcatgccccatgtatggggc
atagaatatgctgggctcaggttgaacctggagctccccatggtgaccatggccaaggct
catcgtaacaagttgttcgactggttcaataaccgcatgcgaagctccaagggcggcaac
gtctatatgcgcgaggcgggtatacgtgcgctcctgtctgagctgaaaaacgataacagc
ttcttctatctgccagatgaagacttaggccctgagaagagtgtcttcgcgccatttcta
ggcactgttaaggctactctgcctgtagtggggcgtcttgcctcggccggtaatgctcag
gtgatgccggtgaagattggctatgatcagcaaaagcgtcagtatctgctaacggtactg
ccgcccatctcacccgaggagatgcaaggcaaggagaatgaggccttagcattaaaccgt
gcggtggagcaggtgataaacgcctatccagagcaatatatgtggttcctcaaactcctg
cgtacccgtccgccgggcgaagcctctctctactag
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