Shewanella loihica: Shew_2244
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Entry
Shew_2244 CDS
T00489
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_2244
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_2244
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABO24110
UniProt:
A3QF62
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Position
complement(2621298..2623976)
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AA seq
892 aa
AA seq
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MNSLTLTAKAVRVGLFAAATSSIAFSGIAIAEEQSDKVERIEVTGSRIKQVDMETSSPVT
VLSAADIALTGEKTVADVLNNSSINAFGSWRGTSGYGSGASATSTVNMRGLGSQATLVLL
DGRRMPGTSSSSGAEADTSQIPLAIVERIEILRDGASAVYGSDAVAGVINIITKKEFDGF
QVDFSTEQPSVEGGDANRFSIAAGFNSEKGNVTFTYEYYDTKAVMDRDIWNMDDPSYGDY
SSFSSVPNGYYNTGEKDADGDDIYAFYSNSEMCADTDNVADTTDGQNNGRCLYSYGAVTK
LFGDMTRNSFMTNFNYDITDNIRFRGRGTASLSETNTRYAGTPVSTNYPVMSADNQYNPT
GKDMTLYMRSVQIGERDTLTETNSFDILGGFVGYADVGNGIDWELNAQHSASTTNAFNYN
LINDNIIQSEIDTGNYDVFNTSGMSYAEWEQQMTALYSAANHTGVYQGKFDSTQIDGLAS
TMLYEQGDFSLAIVGGLEYEMINFKQTSDPESASGIISGGSGGDDVDAERTRQSAYTEIQ
MALPANFELSAALRYERYEQEGTLTGAEGQVTNSSTFDAVVPKFGLSWRPVDSLLLRASY
GDSFRAPNMGEMFSSQSLSFEKAYDSVWCEANNNSDANYCATGNQHKTWFGGNPNLEAEE
GNSLTLGGVWNVTDAWSVELSYYSITYDNKIEAVSASDVIRDEKINGGSDFVTRGPDGKI
EYLESGYVNKASLETSGFDFASSYNFETGFGDFNLKLDVTHILDFKEQADAESEKIDYSG
TQDYPDWRGNFAAAWYYNDFSAAWTTVYIGSQSGAMWRDLGYDYIIDTPSYFKHNFQVGY
THDWNGTITVGVNNLFDEKAPTWYDYAGYRDVNTNLYDVLGRTFYLRINQKF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaactctttgaccttaacagcaaaagcggttcgcgtaggcttatttgccgccgcgaca
tctagcattgcattttctggtatcgcaattgctgaagagcaaagcgataaagttgaacgc
atcgaagtaactggttcgcgtattaagcaagttgatatggagacttcgtctcctgtgact
gtattaagtgcggcagatatcgcgttgaccggtgaaaaaactgttgccgacgtattgaat
aactcttctatcaacgcctttggttcttggcgtggtacttcgggttatggttcgggtgcg
agtgcgacttcaacagtcaacatgcgtggtttaggttctcaggctaccttggtattgctt
gatggccgtcgtatgcctggtaccagctctagctcgggtgccgaggcagatacatctcag
attccactagcaatcgttgaacgtatcgagatcctacgtgatggtgcatctgcagtttat
ggctcagacgccgtagcaggtgtaattaacatcattaccaagaaagagtttgatggattc
caagtcgacttcagcacagagcagcctagcgtagaaggcggtgatgccaatcgtttctct
attgcggctggcttcaactctgagaaaggtaatgtgacttttacctatgagtactatgac
actaaggctgtgatggaccgtgacatctggaacatggatgatcctagctatggtgactac
agctcttttagctctgtgccgaatggctattataacaccggcgagaaagatgccgatggc
gatgatatctatgcattctactcaaactctgagatgtgtgccgataccgataacgttgcc
gataccacagatggtcagaacaatggtcgctgtctatacagctatggcgcggtaaccaag
ctatttggcgacatgacccgcaactctttcatgaccaactttaactatgacatcacggat
aacattcgcttccgtggtcgtggtaccgcatctttgagcgaaaccaacacacgttatgcc
ggtacacctgtatcgactaactatcctgtgatgagcgcggataaccaatataacccaacg
ggtaaggacatgacgctgtacatgcgctctgttcagattggtgagcgtgacaccctaaca
gaaacaaacagtttcgacattctaggtggcttcgtaggctatgccgacgtgggtaatggt
atcgattgggagctgaacgcacagcactctgcgtcgaccactaacgcctttaactacaac
ctgatcaacgacaacatcattcagagcgagatcgatactggcaactatgatgtcttcaat
acctcgggtatgagctatgcagagtgggagcagcagatgactgcactctattctgccgca
aaccacactggtgtataccaaggtaagttcgacagcacgcagatcgacggccttgccagc
accatgctgtatgaacaaggtgatttctcattggccatcgtaggtggtttagagtatgag
atgatcaacttcaagcaaacctctgatccagagtcggcttctggcattatctctggtggt
tcgggtggtgacgatgttgatgctgagcgtacacgtcagtctgcctataccgaaatccag
atggcactgcctgccaacttcgaactgtcagcggcgctacgttatgagcgttatgagcag
gaaggtaccttgacgggtgcagaaggtcaggtgactaactcttctacattcgatgccgtt
gtacctaagtttggtttgagctggcgccctgtcgattcgttgctgcttcgtgctagctac
ggtgattcattccgcgcaccaaatatgggtgagatgttctcgtcgcaatctctgagtttc
gagaaagcctacgattcggtttggtgtgaagccaacaacaattctgacgccaactactgt
gctacaggtaaccagcacaagacttggtttggtggtaacccgaatctagaagcggaagag
ggtaactcactgacattgggtggcgtctggaacgtgaccgatgcgtggagtgttgaacta
tcatattactcaatcacttatgacaacaaaattgaagccgttagcgcatcagacgtgatc
cgtgatgagaagatcaacggtggctctgacttcgtgactcgtggcccagacggtaagatt
gagtaccttgaaagtggttatgtgaacaaggcatcgctggaaacgtctggttttgacttt
gcttcttcatacaacttcgagacaggcttcggtgacttcaaccttaagctagatgttact
cacatcctcgactttaaagagcaggccgatgccgaatctgagaagatcgattactcaggt
acgcaagactatcctgattggcgtggtaacttcgccgcggcttggtactacaacgatttc
agcgcggcttggacaaccgtgtatatcggtagtcagtcaggtgcaatgtggcgcgacctt
ggttacgactacatcatcgacacaccaagctacttcaagcataacttccaggtgggttat
acccatgattggaacggtactatcacagtgggtgtgaacaacctgttcgacgaaaaagca
ccgacttggtatgactatgcgggttatcgcgatgtgaacaccaacctatacgatgtattg
ggtcgtaccttctatctgcgtattaaccagaagttctaa
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