Shewanella loihica: Shew_2341
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Entry
Shew_2341 CDS
T00489
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA
AAA_16
HTH_50
AAA_5
AAA_2
HTH_30
nSTAND3
nSTAND1
DUF6507
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
ABO24207
UniProt:
A3QFF9
LinkDB
All DBs
Position
complement(2734555..2735907)
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AA seq
450 aa
AA seq
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MEQPKLHILVVEDEPDQRALIVQMLTANQYLVESADSVEQAIVMIKASAPDLVFSDWKLG
QLTGMDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKV
AKSIALKRQNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATVLIGGESGTGK
ELAARALYQLSARSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQKIGKLEAADGG
TVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQQEVAEGRFR
EDLYYRLNVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDTLKSLLDHSWP
GNVRELANRIERFVLLGDEEEMVQELGAAPQPLDTKRFVLPEAGIEWESFEKDCLRQALD
RFEGNRTKAAKCLGLSYKAFLYRLEKYQLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcctaagttgcatattttggtggtagaggatgagccggatcagagagcattg
atcgtacagatgttgacggccaaccagtatttggtggagagtgccgacagtgtcgagcag
gcgatcgtgatgattaaggcatcggcgccggatctggtgttttccgactggaagctgggg
cagttaaccggcatggatctgcttaactatgtgcgccgcgaacacccggatatgggcttt
atcatcgccaccgcctacggcaccatcacccacgcggtggatgccatgcaagcgggggcg
gacgactatctggccaagccctatcagcgccagagtctattgttggccatcgaaaaggtg
gccaagtctattgcgctgaagcggcagaaccgccgcctctcttccgagctgtctcagcag
caggagctggtggggctggtggggcgctctgccctgatgcagaaggtgtatcagagggtg
cagcgggtgagcgccacagatgcaaccgtgctgattggcggcgagagtggcacgggcaag
gagctggcggcgcgggcgctgtatcagttgtcggcgcgtagccataagcccttcgtcgcc
atcaactgcggcgcgatccccgagtccttggccgaggctgagctgttcggcgccgagaag
ggggcttatacgggggccaatacccagaagataggtaagctagaggccgccgatggcggc
accgtctttctcgacgagataggcgagctgcccctgctgcaacagaccaaactgctgcgt
ttcttgcaggagggggtgatatcccgtctcgggcagaacagcgagatcaagctggatgtc
agggtgatcgccgcgacccatagggatctgcagcaggaggtggccgaggggcgctttcgc
gaggatctctattaccgcctcaacgtggtgcctatccatatgccggcacttagggagcga
ccggaggatatcggccgactggtggagcactttcttaaactccacgccaatcaatatggc
atggaggtgcccaagctaagccgggataccttaaagtcgctgctggaccatagctggccg
ggtaatgtgcgtgagctggcgaatcgcatcgaacgtttcgtgttactcggcgatgaagag
gagatggtgcaggaactcggcgccgcgccgcagccgctggataccaagcgttttgtcttg
cccgaggcgggtatcgagtgggagagtttcgagaaggattgcctgcgccaggccctggac
cgtttcgagggcaatcgcaccaaggcggctaagtgtttaggcttgagttataaggccttt
ctctatcgcctggagaaatatcagctggtctag
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