Shewanella loihica: Shew_2379
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Entry
Shew_2379 CDS
T00489
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_2379
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Shew_2379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABO24245
UniProt:
A3QFJ7
LinkDB
All DBs
Position
complement(2782295..2785720)
Genome browser
AA seq
1141 aa
AA seq
DB search
MRLTQIKLAGFKSFVDVTKIPFNQPLTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS
MADVIFNGSSARRPVSVASVELSFDNQQGRLGGQYASYQAIAVKRQVSRDGESSYFLNGQ
KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQELRVFIEEAAGISRYKERRRET
ENRIRHTRENLERLGDIRQELGRQIDKLAEQAEAARQYRALKQTERDQHAQLEVAKYLEL
SAQSDKLSQEIEAKTLTQSEGDAGREALSRNLTEIKLKLDELERQEQQQVEAFYLNGNQI
AKLEQEVKHRQQQDAHLKQRIKQDEEKLALLKAQEQALILARGDLDERQHGAREAHQALQ
LQLELLDEQLGEVELSLEQAQEAESQAKQAVNQCQLRLELTKGELKHKQSALAQVKSQHQ
SASRQLEQLSHQDETDNLALQHAQCERLAERLDELKGEIELGAATQSQRQEQARQTQAQV
EALSQSLAEERGRLAVVKRILPQEDALQGRALWQAIQVTPGWEAAVDLLLDGLLTQKVSD
KHSGMETENESGFELSRSQKWTGLSSEVNLAPWLSRLNWADSLSQAKAMLGSIEDDERIV
TADGYIVGNGFVLQKAEQGRQLVQLKAEQQALELSIAASVEAIDERRAVLAEVNQALDEQ
REALTQLNTSLQGTQLERERLMAQAQATQERIAQQGEQQARLKALLEEQIGELEAVEQSL
SELTSRRDQDEAQLTELTRSADSQVAGLADRRAQHKALGRERQALALQSQQLQQSLQAIN
TEQALSRQQGEQLERQMKELAQELSELQGQLEGQDKLDGKLQADAMAAQLNDALARQGEV
QAALDALRLQQAELQNQADEIGAKQKQQLGKLEHLTQAISALKLRREGIKGQIDSQLAQI
RSQEVDIAEVQATLDLTVSLSHRQKTLERTKAQIEHLGAINLAAIEEFEQQSQRKAYLDS
QDADLAKALGSLEEAIRKIDRETKTRFKETFDKVNQDLGVLFPKVFGGGSAYLALTDDDL
LETGVTIMARPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDAN
VDRFCRLVKEMSQSVQFVYISHNKITMELADQLIGVTMHEPGVSRIVAVDIDEAVALADA
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagactcacacagataaaacttgctggatttaagtcgtttgtcgatgtcactaaaatc
ccttttaaccaaccgcttacggcaattatcggccccaatggctgtggcaagtccaatgtg
atcgacgcggtgcgctgggtgttgggcgaaagttctgccaagcacctgcgcggcgactcc
atggctgacgttatctttaacggctcctcggccagacgccctgtctctgtggccagtgtc
gagctcagcttcgacaatcagcagggccgtctgggcggtcagtacgccagctatcaggcg
atcgccgtaaaacgtcaggtgagccgcgacggtgaatccagttacttcctcaatggccag
aagtgtcgtcgtaaggacattaccgatctcttcatgggcacgggactcggtccgcgcagc
tacgccattatcgagcagggcaccatctcacggcttatcgaatctaagcctcaggagctg
agggtcttcatagaagaggccgccggcatctcccgttacaaggagcggcgacgcgaaacg
gaaaaccgcatccgccatacccgcgagaacctcgaacgcttaggggatatccgtcaggag
ctgggccgacagatagacaagctcgccgagcaggccgaggctgcgcgtcaatatcgggca
ttgaaacagacggagcgggatcaacatgcccagctcgaggtggccaaatatctggagctg
agcgcccagtctgacaagttatcccaggagatagaggctaagacgctgacccagagcgag
ggcgacgctgggcgagaagccctgtcgcgcaacttgaccgagattaaactcaaactcgat
gagcttgagcgccaggagcagcaacaggtcgaggccttctatctcaatggcaatcagatc
gccaagctcgaacaggaggtcaagcatcgtcagcagcaagatgcgcacctcaagcagcgt
atcaaacaggacgaagagaagctggcgctgctaaaggctcaggagcaggcgctcatattg
gcgcgcggcgatctcgatgaacgtcagcacggtgccagggaggctcatcaggcgttgcag
ctgcagctcgagctactcgatgagcagcttggcgaggttgagttatccctggagcaggca
caggaagccgagagccaagccaagcaggcggttaaccaatgtcagctacgcctggagctc
accaagggggagctcaagcataagcagagcgccctggctcaggtaaagtcgcaacatcag
agcgcgtcacgccagcttgagcagttatcccatcaggatgaaaccgacaatcttgcgctg
caacatgctcagtgtgaacggctcgccgagcggctcgatgagctgaagggcgagatagag
ctgggggccgccactcagtctcagcgacaggagcaggcgcgccagacccaggcgcaggtc
gaagccctgtcgcagtccttggccgaggagcggggacgcctggcggtggtcaaacgtatc
ttacctcaggaagatgcgcttcagggccgcgccctctggcaggcgattcaggtcacgcct
ggctgggaagcggcggtcgacctgttgctcgacggtctgctcacccagaaggtgagtgac
aagcacagcggaatggaaacagagaatgagagcggctttgagttaagcagatctcagaag
tggactggcctcagcagcgaggtcaacctggcgccctggctgtccagactcaattgggcc
gatagcctgagtcaggctaaggccatgctggggtcaatcgaagatgacgagcgcatagtg
accgccgatggctacatcgtcggtaacggctttgtgctgcaaaaggccgagcagggccgc
cagctggtacagctcaaggccgagcagcaggcgcttgagctcagcatagcggccagtgtc
gaggcgatagatgagcgcagggcggtgcttgccgaggtcaatcaggccttggatgagcag
cgtgaggcgctcacccagcttaataccagtttgcaggggacgcagcttgagcgtgaacgc
ctgatggcacaggctcaggcgactcaggagcgtatcgcccagcaaggggagcagcaagcc
aggctgaaggccttgctcgaagagcagatcggcgagctagaagccgtggagcaaagccta
agtgagctgacaagtcgtcgcgatcaagacgaggcgcagctgactgagctgacgcgctca
gccgacagccaggtggcaggacttgccgatcgccgcgctcagcataaggcgctgggccgc
gagcgtcaggcgttggcgctgcagtcccagcagctacagcagtcgctgcaggcgatcaat
accgagcaggcgcttagccgtcagcagggtgagcagctcgagcggcagatgaaggagctg
gcccaagagctgagcgagcttcaagggcaactcgaggggcaggataagctagatggtaag
ctgcaagccgatgccatggcggcccagctcaatgatgccttggcgcgtcagggggaggtg
caggcggcgctcgatgcattgcgtctgcagcaggctgagctgcaaaatcaagcagacgag
atcggcgccaaacaaaaacaacaacttggcaagttagagcacttgactcaagccatcagc
gcgttaaagttacgtcgcgaagggataaaaggtcaaattgacagtcagttagcccagatc
aggagccaggaggtggatatcgccgaggtgcaggcaacgctggatctgactgtgagcctg
agtcatcgtcagaagacgcttgagcgcacaaaggcgcagatcgaacatcttggcgcgata
aatttggcggcgattgaagagttcgagcagcagagtcaacgcaaggcctatctcgacagt
caggatgcggacttggccaaggccctcggcagcctggaggaggcgatccgcaagatcgac
cgcgagaccaagacgcgctttaaggagaccttcgataaggtcaaccaagatcttggtgtg
ctgtttcctaaggtgttcggcggcggcagtgcctatctggcgctgaccgatgatgatctg
ctggagactggcgtgaccatcatggccagaccgccggggaaaaagaatagtacgattcac
ctgctttcgggtggagaaaaagcattaaccgctttatcattggtatttgcgattttcagg
ctgaatccggcgcctttttgtatgttggatgaggtcgatgcaccgctcgatgatgccaat
gtcgacaggttctgccgactggtaaaagagatgtctcagagcgtgcaatttgtttatatt
agtcacaataagatcaccatggaattggccgatcaactaataggtgtcactatgcacgag
ccaggggtttcacgcatagttgccgtcgatatcgatgaggcggtggcattagccgacgca
gtataa
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