Shewanella loihica: Shew_2431
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Entry
Shew_2431 CDS
T00489
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_2431
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_2431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_7
TPR_16
TPR_6
TPR_12
TPR_14
TPR_10
ANAPC3
TPR_8
FeoB_Cyto
Ni_hydr_CYTB
Motif
Other DBs
NCBI-ProteinID:
ABO24297
UniProt:
A3QFP9
LinkDB
All DBs
Position
2856557..2858638
Genome browser
AA seq
693 aa
AA seq
DB search
MIHFLRPEWLLALIPLALLLWLRKRQRHQASSWNRYIAPHLAKVLVSGQASNKKQHLGLI
AFIWLVSVLALSGPALTKQQLPVFEANLGRVIVMDMSLSMYATDLAPNRLTQAKFKATDL
IKSLKEGETGLVAYAGDAFTISPLTRDKSTLLNLLPTLSPEIMPVLGSNLPAALDQAKQL
LVQGGHLKGEIILLADGVNPDQIGEAKSILDDTQYRLSIIAMGTNQGAAIRLPDGQLMRD
QSDQVVVSQTDLSQLNSLIGNSGGKLFAYRADGKDLESLTQSLSQESDAKTSDRQGEAWQ
DLGPYLALLLLLPALLSFRHAFAALACLVILAPSPEAQAASWQHPFSTDDQRAMQAYQAQ
DFQGAAEQFTSPQWKAASLYKNGDYQEALKLFEQDDSASGLFNQGNSLMQLNDLDKAIER
YQQALKKDPQLTQAEQNLELAEQLKQQQQASQDQGQSDQKKSEQNQSDQDQSNQDSNKQD
KSQQDGAGQNQGQQQGQGDQQSGQGSRGQQSQGQNGQQEDEQGSNQQGSDKQGSDKQSAS
QESPEQETPEQQASAEQEASQDGQSQNQQTGAANDAQMSADPAKDAKNQMDANANQSDAG
QQMGQGQQPQDEQESTQAQAANMTQGKPGEGDEQGEPVAAATNAIAPEDLPPEMQRALTG
VIDDPQVLLRNKMQLEYQKRRRQGATIKDNQQW
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgatccattttctccgtcccgaatggctgctggccctcatccccctggcgctattactc
tggctgcgaaagcgccagcgacatcaggcctcgagctggaatcgctatatcgcgccgcac
ctggctaaggtgttagtgagcggtcaggcaagcaacaaaaaacaacacctgggcctcatc
gcctttatctggctcgttagcgtcctggctctctctggcccggcactgaccaagcagcaa
ctacctgtatttgaagccaacctgggccgggtgatagtgatggatatgtcgctctccatg
tacgccaccgatctggcgcccaacaggctgactcaggccaagttcaaggcaacggatctg
attaaaagcctcaaggagggtgagacgggtcttgtggcctacgccggcgacgcctttacc
atcagcccgctgacccgggacaaatcaactctactaaacctgctgccaaccctgtcgccg
gagatcatgcctgtgctgggctccaacctgccagcggcgctagatcaggctaagcagctg
cttgtccagggcggtcacctcaagggcgagatcatcttgctggccgatggcgtgaatccg
gaccaaatcggcgaagccaaatcgatactggacgatactcagtatcgtctctccatcatc
gccatggggacaaaccagggcgccgccatccgcttgccggatggacaactgatgcgtgac
caaagcgatcaggtggtggtcagtcagacggatctcagccagcttaatagtttaattggc
aacagcggcggcaagttgtttgcctaccgcgccgatggcaaagatcttgagtcactgacc
caaagcttaagccaggagagcgatgccaagacctcagatcgccaaggggaagcctggcaa
gatctcggcccctatctggccctgctcctgctgctgccggcgctgctgagtttcagacac
gccttcgccgcgcttgcctgtttagttattctcgccccgagcccagaagcccaggctgcc
agttggcaacatcccttcagcacagacgatcagcgggcgatgcaggcctatcaagcgcaa
gactttcaaggcgcggcagagcaatttacctcgccccagtggaaggccgcatccctgtac
aagaatggtgattatcaagaggcgctcaagcttttcgagcaggatgactcggcgagtggc
ctgtttaatcagggcaacagcctgatgcagctcaatgatctcgacaaggccatcgagcgt
tatcagcaggcgcttaagaaagaccctcagcttactcaggccgagcaaaatcttgagttg
gccgagcagctaaagcagcaacagcaagctagccaagatcaaggccaatctgatcagaaa
aagtccgagcagaatcaatctgatcaagaccagtcgaatcaggactcaaataagcaagat
aagtcccaacaagacggcgccgggcaaaatcaaggccagcaacaaggccaaggcgatcag
caatcgggccagggctcgagaggccagcagtctcaaggccagaatggtcaacaagaagat
gagcaaggctctaaccagcaaggctctgacaagcaaggctctgacaagcaaagcgctagc
caagaaagccctgagcaagaaactcccgagcaacaagcctctgccgagcaggaagccagc
caggatggtcagtcgcaaaaccagcagacaggcgccgctaatgacgctcagatgagcgcc
gatccggccaaagacgccaaaaatcaaatggacgccaacgcaaatcaatctgacgctggc
cagcagatgggacaaggccaacagccgcaagacgaacaagagagcactcaagcccaggcc
gcgaatatgacccagggcaaacccggcgagggcgatgagcaaggcgagccggtagccgcc
gcaaccaacgccattgcgccagaagatctgccccccgagatgcagcgcgcccttaccggg
gtgatagacgaccctcaggtcttgctgcgcaacaagatgcaactggaatatcaaaaacgc
cgccgtcagggggcgaccataaaggacaatcaacagtggtaa
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