Shewanella loihica: Shew_2498
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Entry
Shew_2498 CDS
T00489
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
slo
Shewanella loihica
Pathway
slo01503
Cationic antimicrobial peptide (CAMP) resistance
slo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew_2498
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Shew_2498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_2498
Transporters [BR:
slo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
Shew_2498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABO24364
UniProt:
A3QFW6
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All DBs
Position
2937254..2938897
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AA seq
547 aa
AA seq
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MKELLKRLTLGSAFCCIVPLLSACGPTRVPSGLVYCSEGNPESFNPQLVTSGTTVDATSQ
QLYDGLVDYDARTGEMTPSLATSWHLSDDEKVYTFELRQDVQFHRSDIFTPSRNFNADDV
LFSFNRIIDTDNPYHFVSKSGYPFFQSIGFAELIDDIEKIDDYHVAFHLKHKDASFLSNL
ATGFAVILSKEYADQLQRTGQEELLDKLAIGTGPFRLIDYVKNDFIRYYRNPYYWRLTPE
VDQLVFDITPKSTTRLAKLITGDCNVSALPKAGELPVVIEKEDLEVESLPGFNVAFWAFN
TERIPFNDVRVRRALAHAIDKENILRAVYQKTAEEAVGLLPPLSWAYSANEKMIDYNPEK
ARELLDEAGVKNLTIDIWAMPVARIYNPNAHKTAELIQADLANIGVKVNIVNYDWSVFNQ
KLSQHGYDSVLIGWNADNSDPDNFFTPILSCASVGSNSNRSRWCDPAFDHILNAAKSTTD
REKRARLYQEAEQYVAEQVPMLPFAHATRMVVKQKSVTEAKLTPFGGISFTKTSAQPRLA
SDNKESN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagctgctcaaacgtctcacgttaggttcggcgttttgttgtatcgtgccactg
ctgtcggcctgtggaccgacgcgagtgccctcgggattggtctattgctctgaaggcaac
cctgagtccttcaacccccaattggtcacctctgggaccacggtcgatgcgacctcacag
cagctttacgacggtctggtggattacgacgccagaaccggtgagatgaccccatctctc
gccacctcctggcacctcagcgatgatgagaaggtctacaccttcgagcttcgccaagac
gtgcaatttcatcgctccgacatctttaccccgagtcgcaactttaatgccgacgatgtg
ctcttctctttcaaccgcatcatagataccgacaacccctatcactttgtctctaaaagc
ggttaccccttcttccaaagtatcggctttgccgagcttatcgacgacatagagaagatt
gatgactaccatgtcgcctttcatctcaagcataaagatgcctctttcctctctaacctg
gcgactggctttgcggtgatcctctctaaagagtatgccgaccaactacagcgcacgggc
caggaagagttgctggacaaactggcgataggtaccggccccttcaggctgatcgattac
gtcaagaacgactttattcgttactaccgcaacccctactactggcgcctgaccccagag
gtcgatcagctggtgtttgatatcacgccaaagagcaccacccgcctggctaagcttatc
accggcgactgtaacgtctcggccctgcctaaggccggtgagctgccggtggtgatcgag
aaagaggatcttgaggtggagtcgctccccggatttaacgtcgccttctgggcttttaat
accgagcgaattccctttaacgatgtcagggtgcgccgcgcactggcccacgccatagat
aaagagaacattctcagggctgtgtatcagaagacggccgaagaggcggtgggcctgctg
ccgccactctcctgggcctattcggccaacgagaagatgatcgactacaacccagagaaa
gcccgcgagctactcgacgaggctggggtaaaaaacctcaccatagatatctgggccatg
ccagtcgcccgtatctataaccccaacgcccataagaccgccgagcttatccaggcggat
ctggccaacattggcgtcaaggtcaatatcgtcaactacgactggagcgtcttcaatcag
aagctgagccaacatggttacgattcggtgctcatcggctggaacgccgacaacagcgac
cccgataacttctttacccctattttaagctgcgcctcggtgggctcaaacagcaaccgt
tcgcgctggtgtgaccctgccttcgaccatatcctcaacgcggccaagtccaccacagac
agagagaagcgagcgcgtctctatcaagaggccgagcagtatgtggccgagcaggtacct
atgctgcccttcgcccacgctacccgcatggtggtgaaacaaaaatcggtgaccgaggct
aagctgaccccctttggcggcatctccttcaccaagacgtccgcccagcctcgccttgcc
agcgacaacaaggagagtaactga
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