Shewanella loihica: Shew_2573
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Entry
Shew_2573 CDS
T00489
Name
(GenBank) 3-methylcrotonoyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
slo
Shewanella loihica
Pathway
slo00280
Valine, leucine and isoleucine degradation
slo01100
Metabolic pathways
Module
slo_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shew_2573
Enzymes [BR:
slo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Shew_2573
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Dala_Dala_lig_C
GARS_A
HlyD_3
Biotin_lipoyl_2
RnfC_N
ATP-grasp_3
GCV_H
DUF2118
PTS_EIIA_1
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
ABO24439
UniProt:
A3QG41
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Position
3032237..3034270
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AA seq
677 aa
AA seq
DB search
MFTKLLIANRGEIACRIIKTAQVMGIKTVALYSDADKDARHVAMADESFYLGGSAPSESY
LKGELILEIAKRSGAQAIHPGYGFLSENADFARQCEQAGIAFVGPSADAIDAMGSKSAAK
IIMEQANVPLVPGYHGDDQSDEVLLKASKEIGFPQLIKAAYGGGGKGMRIVESESEALEA
INSARREAASSFGNDKLLIERYLRQPRHVEVQVFADTQGNCIYLSDRDCSIQRRHQKVVE
EAPAPGLSDSLRRAMGEAAVAAAKAIDYVGAGTVEFLLDTHATEESNSFYFMEMNTRLQV
EHPVTEMVTGQDLVKWQLMVASGSELPLSQEDVRIHGHSFEVRIYAEDPQNEFLPASGKL
NFLREPEQNRYVRIDSGIRENDVISNFYDPMIAKLIVWDESRPRALQRLVHALESYQISG
LKHNIEFLANIAEHKAFSQADFSTDFIERYGDTLIGANLDGDNSHEQNGALAFAALYHLC
AQKEQAKLTATNSQDPYSPWGQVSGFRLNRSGMHQLSLLDDEHEVQHLTLSQIGDCYYLN
LNDQQLTLSGELKQDLLHAEINGHKSKIPVSREGDDFTLFLPSGSYHFRALQTEVVEEQA
NSEDKLKAPMNGTIVTHLVEVGDEVEAGQGLMVMEAMKMEYTIEAPFDGTVAAFFFQPGE
LVSDGALLLEVTAKEDA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaaattattgatcgccaaccgtggcgaaatcgcctgcagaatcatcaagacc
gcacaggtcatgggcatcaagacggtcgccctctattcggacgccgacaaggacgctcgc
catgtggccatggccgacgagtccttctacctaggtggcagcgccccgagcgagtcttac
ctcaagggcgaattaatccttgaaatcgccaagcgcagcggcgcccaggcgatccaccct
ggctacggcttcctgtctgaaaacgccgacttcgcccgccagtgtgagcaggccggtatc
gccttcgtcggcccgagcgccgatgcaatcgatgccatgggcagcaagagcgctgccaag
atcatcatggaacaggccaatgtgcctctggtgccaggttatcacggcgacgaccagagc
gacgaggtgctgctcaaggcctctaaagagataggcttccctcagctgatcaaggccgcc
tacggcggcggtggtaaggggatgcgcatcgtcgagtccgagtctgaggccctggaggcg
atcaactcggcccgccgtgaagccgcctcctcctttggcaacgacaagctgctgatcgaa
cgctacttgagacagcctcgccacgtcgaggtgcaggtgtttgccgatacccagggcaac
tgcatctatctgtcggatcgcgactgctccatccagcgtcgtcaccagaaggtggtcgaa
gaagcaccggcgcctggcctgtctgacagcctgcgccgcgccatgggcgaggccgccgtg
gccgccgccaaggcgatcgactatgtgggcgccggcacggtagagtttctgctggacacc
catgcgaccgaggagagcaatagcttctacttcatggagatgaatacccgcttgcaggta
gaacatccggtgaccgagatggttacgggccaagacctggtcaagtggcagctgatggtc
gccagcggcagcgaactgcccctgagccaggaggatgtacgcatccacggccactccttc
gaggtgcgtatctacgccgaagatccgcagaacgagttcctacccgccagcggcaagctc
aacttcctacgtgagcctgagcagaaccgctatgtgcgcatcgattccggcatccgcgag
aacgatgtgatcagtaacttctacgaccctatgatcgccaagctgatcgtctgggatgag
tcgcgcccccgcgccctacagcgcctggtgcacgccctggagtcctaccagatcagcggc
ctcaagcacaacatagagtttctggccaacatcgccgagcacaaagccttcagccaggcg
gatttcagcacagactttatcgagcgctatggcgacaccctgataggtgccaacctggat
ggcgacaacagccatgagcagaatggcgccctggccttcgccgccctctatcacctgtgc
gcccagaaggaacaggccaagcttaccgccaccaacagccaagatccttactcgccatgg
ggacaggtgagcggcttcaggctcaaccgcagcggcatgcatcagctgtctctgctggac
gacgagcatgaggtgcagcacctgaccctaagccagattggcgattgctactacctgaac
ctgaacgatcaacagctgaccctgagcggcgagctgaagcaagatctgctacacgccgag
atcaacggccacaagagcaagatccccgtcagccgcgaaggcgacgacttcaccctcttc
ctgccaagcggcagctatcacttccgcgccctgcagacagaggtagtggaggagcaagcc
aacagtgaagacaagctcaaggcgccgatgaacggcactatcgtcactcacctggtcgag
gtgggcgatgaggtcgaggcgggtcaaggcctgatggtgatggaagcgatgaagatggaa
tacaccatagaggcgccgtttgacggcacagtcgctgccttcttcttccagccaggcgaa
ttggtgagcgacggcgccctgctgctcgaagtcactgcgaaagaggacgcttaa
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