Shewanella loihica: Shew_2585
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Entry
Shew_2585 CDS
T00489
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_2585
03400 DNA repair and recombination proteins [BR:
slo03400
]
Shew_2585
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Shew_2585
DNA repair and recombination proteins [BR:
slo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Shew_2585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
eIF3_subunit
Nre_N
SlyX
Motif
Other DBs
NCBI-ProteinID:
ABO24451
UniProt:
A3QG53
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All DBs
Position
3049582..3049974
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AA seq
130 aa
AA seq
DB search
MSEFLDILTHGRRFKAAVKDLSVEDLKDVAVKLEKIITEKEKQAEEESAVMAERNAKIEE
IRQQMEAVGLSIDDLGTVAAKPAPKKRAPRPPKYKIEVNGETITWTGQGRTPTVFKNELD
KGRSLEDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttctagatatattgacgcatggtcgtcgctttaaagctgctgttaaagat
ttgtcggtagaagatttaaaagatgtagcggttaagcttgaaaaaatcatcaccgagaaa
gagaagcaagcagaagaagaaagcgcggttatggccgagcgcaatgcaaagatagaagag
attcgccaacaaatggaagctgttggtttatcaattgacgatttaggtacagtggctgct
aagccagctcctaaaaaacgtgctccacgcccaccaaaatataaaattgaagtgaatggc
gaaacgatcacttggacgggtcagggtcgcacaccaaccgtatttaagaatgaattagat
aagggtcgttcactcgaagacttccttatctaa
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