Shewanella loihica: Shew_2622
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Entry
Shew_2622 CDS
T00489
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
slo
Shewanella loihica
Pathway
slo00540
Lipopolysaccharide biosynthesis
slo01100
Metabolic pathways
Module
slo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Shew_2622
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Shew_2622
Enzymes [BR:
slo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
Shew_2622
Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Lipid A
Shew_2622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
ABO24488
UniProt:
A3QG90
LinkDB
All DBs
Position
complement(3096246..3097394)
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AA seq
382 aa
AA seq
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MNQSNQKVFAMVAGELSGDILGAGLIKALKQQYPDARFVGIGGPQMDALGFESLFSFEEL
AVMGLVEVLSRLPRLLKVRKTLIDELTALKPDCFIGIDAPDFNIGLELKLKAQGIKTVHY
VSPSVWAWRPKRIFKIAKATNMVLSLLPFEKAFYDKHNVPCTFVGHTLADDIPLESDKLS
ARETLGLDPHAEYLAILPGSRGGELKQLAEPFVQAAVKLRQRYPDLKFVTPLVNAKRRAQ
FELALKTHAPDLDIHLVEGQSRTVMAAADAILLASGTATLEAMLVKRPMVVAYRVSPITY
RIAKGMMQISHYSLPNLLAGREIIPELIQADCTPDKIVDAVSNQLDGDHKPLMESFMTLH
QQLRCDASARAAQAVIELVETK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagcaatcaaaaagtattcgccatggtggcgggtgagctgtccggtgatatt
ctcggcgccggcctgatcaaggccttgaaacagcaatacccggatgcccgcttcgtcggt
atcggcggcccgcagatggatgccttggggtttgagtccctgttctctttcgaagagctg
gccgtgatgggcctggtcgaggtgctgtcgcgcctgccacgcctgcttaaggtgcgtaaa
acgctgatcgacgagctgaccgccctaaagccagattgctttatcggtatcgatgccccc
gatttcaacataggtctggagctgaagcttaaggcgcaggggatcaagacggttcactat
gtcagcccttctgtgtgggcctggcgccccaagcggatcttcaagatcgccaaggcgacc
aacatggtgctgtcgctgttgcccttcgagaaggccttctacgataagcataatgtgcct
tgtaccttcgtcggccacacactcgcagacgatattccgctagagagcgataagctcagt
gcccgcgagaccctggggttagatccccacgccgaatatctcgccatcttacccggctct
cggggcggcgagctcaagcagctggccgagcctttcgtgcaggcggcggtaaagttgcgc
cagcgctacccagaccttaagtttgtcaccccgctggtcaatgccaagcgtcgggcccag
tttgagctggccctcaagacccatgcgccggatctcgacatacatctggtcgagggacag
tctcgcaccgtgatggccgcagccgatgctatcttgctggcgtctggcaccgcgaccctg
gaggccatgttggtgaaacgccccatggtggtggcctaccgggtatcgccgatcacctat
cgtatcgctaagggaatgatgcagatatctcattactccttgcctaatttgctggcgggc
agggagatcatccctgagctgatccaggccgactgtacaccagataagatagtcgacgcc
gtttccaatcagctcgatggcgatcataagccgttgatggagagctttatgacgctgcat
caacagctaagatgcgatgccagtgcgcgcgcggcccaggcggttatcgagctagtggag
acaaaatag
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