Shewanella loihica: Shew_2718
Help
Entry
Shew_2718 CDS
T00489
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_2718
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_2718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABO24584
UniProt:
A3QGI6
LinkDB
All DBs
Position
3216809..3219220
Genome browser
AA seq
803 aa
AA seq
DB search
MRLAVSALAVSSALILPGVHAEDQQATLDQQASFEKIEIIGSRIALRTATDSVAPVDIIT
AEQLESTGMTETAKALQFAAPSYSFPFSSVTDGSDAVRPASLRGLSPDHTLVLVNGKRRH
GSALVHLSGTVGKGSSNVDLNAIPMTAIKRIEILRDGASAQYGSDAIAGVINVVLKDNEQ
GGSLSAQAGQTYAGDGEQWRLGANHGIALGDDGFVNVSLEAHHKDSTNRAGLDPRQQYPQ
LADGSPDPREATFNRKSHQVGDAEYDNLGLFINAAKAISDNGELYAFGGVSKRETKSGAF
YRRALDKRNLTEVYPDGFLPQINPEIIDTSLVLGYEFTLGEWNIDTSAGHGENSFNYNIV
NSLNASMGPDSPTEFDAGTLSTRETNLNIDASRYFNFANDSEILFAAGVSWRKNGYQIEA
GESASYINGGFDNRAAGSQGFSGFTPESEVDETRDNTGVYVELENQLTDDFYWAAALRYE
NYSDFGDNTSWKLAGRYDFTDNLALRGTINTGFRAPSVQQLYFSNISTLFNPDPVTGQLV
PTESGTFNTLSPVTKGLGINELEPELSQSFSLGLVYRNDAGLALTLDAYQISIDDRIILS
SSVTPDDSPAVAEALAGTNAESARFFINAVDTRTRGVDLVISQDFDIGAWGDLQANLAYA
YNKTEIQDIHFPQVLDGVGKELFDRIEQTRMTAATPNNTGNLGLTHRLGDFKTNVRLSYF
GDYTVGYSSGDVTYSDQWVMDMSVQYAATEALSFTAGAQNLFDVYPEKRPDSNNFNGIFV
YPLTNTPFGFNGGYVFLEAKYTY
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttagctgtttccgcattagcagtgtcatctgcactcatccttcctggcgtccac
gctgaagatcaacaagcgaccttagatcaacaagccagcttcgaaaaaatcgagatcata
ggttcacgtatcgcactacgtactgccacagacagcgtggcaccggtggacattattacc
gcagagcagctcgaatcgacggggatgacagaaacggctaaggcactgcaatttgccgca
cccagctacagctttccattctcatcggtaaccgatggctcagatgcggtgcgcccggcg
agcctgcgcggcctatcgccggatcacaccttagtcttggtcaacggcaagcgtcgtcac
ggctcggcactggtccatctgagtggcacagtaggtaaaggctcatctaacgtcgacctg
aacgccattccgatgacggcaatcaagcgtatcgagatcctgcgtgacggtgcgtcggcg
caatatggctccgatgcgattgccggcgtcatcaacgtggtgctaaaagacaatgagcaa
ggtggtagcctatccgcacaagctggccaaacctacgcgggtgacggcgaacagtggcgc
ttgggtgccaaccatggcatcgccctgggtgacgatggcttcgttaatgtctcactcgag
gcacaccataaagacagcactaaccgcgctgggctagatcctcgccagcagtatccgcag
ttagccgatggctcaccggatcctcgcgaagccacctttaatcgcaagagccatcaagtt
ggcgacgccgaatacgacaacctaggcctgttcatcaacgccgccaaggccatctcagac
aacggcgagctatacgctttcggtggcgtgagcaaacgcgaaactaaatcaggcgccttc
taccgcagagccctggataagcgtaacttaaccgaagtttatcccgacggtttcttaccc
cagatcaaccctgaaataatcgacacctcgttagtgctaggttatgagttcaccctgggt
gaatggaatatcgatacctccgcaggccatggcgaaaactcatttaactacaacattgtt
aactcattaaacgcatctatgggccccgatagcccgaccgaatttgatgccggcaccttg
tcgacccgtgaaaccaacttgaatatcgatgcgtcgcgctattttaactttgcaaacgac
tcagagatcctctttgccgcgggtgtatcatggcgcaagaatggctaccaaattgaagcg
ggcgagagtgcttcctacatcaatggcggtttcgataatcgcgccgccggcagccagggc
ttctcgggctttaccccagaatctgaagtcgacgagacccgagataacacaggcgtttat
gtcgagcttgaaaaccagttaaccgatgacttttactgggcggcggcgctgcgttacgaa
aattattcagacttcggcgacaacaccagctggaagctagcgggccgctatgactttacc
gacaacctggccctgcgcggtaccatcaacacaggctttagagcgccaagcgtgcagcag
ctgtacttcagcaacatctctaccctgtttaaccctgatcctgtcacgggtcagttggta
ccgacagaatcgggcaccttcaacaccctgtcacccgtaacaaaagggctagggatcaat
gaactagagccagagttatcacagtctttcagtctaggtctggtctatcgcaatgatgcg
ggcctggcactgaccttggacgcctatcagatctctatcgatgaccgaatcatcttgtcg
agctcagtcacgccggatgattcacctgcggtcgctgaggcccttgccggcaccaacgcc
gaatcggcacgcttcttcatcaacgccgtcgatacccgtacccgaggggttgatctggtg
ataagccaggattttgatatcggcgcttggggcgatctgcaagccaacctggcctatgcc
tataacaaaacggaaattcaagacattcatttcccgcaggtgttagacggcgtaggtaaa
gagctcttcgatcgtatcgaacaaactcgtatgaccgcggccacgccaaacaacacaggc
aacctgggactcacccataggctaggtgatttcaagaccaacgttcgtctaagctacttt
ggcgattacacagtgggttattcctcaggcgatgtcacttacagcgaccaatgggtaatg
gatatgtcggtgcaatacgcggcaactgaggcgctaagctttactgccggggcgcaaaac
ctgttcgatgtctacccggagaagcgtccggacagcaataacttcaatggcatcttcgtc
tatccattaaccaatacgccatttggctttaatggtggttacgtcttcttagaagccaaa
tatacctactaa
DBGET
integrated database retrieval system
