Shewanella loihica: Shew_2807
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Entry
Shew_2807 CDS
T00489
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slo03400
]
Shew_2807
DNA repair and recombination proteins [BR:
slo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shew_2807
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
AAA_18
Rad51
nSTAND3
AAA_14
AAA_19
CobU
DUF7125
AAA
NPHP3_N
AAA_30
cobW
AAA_11
AAA_16
Zeta_toxin
NTPase_1
ABC_tran
AAA_23
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ABO24673
UniProt:
A3QGS5
LinkDB
All DBs
Position
complement(3325002..3326375)
Genome browser
AA seq
457 aa
AA seq
DB search
MAKNKTAYVCSECGQDFPRWQGQCNACGEWNTISEVRLAPAKSSAGSVAGYAGAVGGGSK
KLSEVEEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP
SLYCTAEESLSQFKNRVNRLRLDCNEENLYLMAETNVEAIIAELEAKQVKFAVIDSIQAV
VTDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQVRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSTTESPGAAITCI
RKGNRNLLLEIQCLTTEAEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIYHDTYFNLVG
GLKIDESETCIDLALVAALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIFIPFRNYHKSMEGLGAKINPIKTIHELLELIC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaataaaacagcatatgtgtgcagcgaatgtggtcaggactttccccgctgg
caggggcagtgtaatgcctgcggcgagtggaacaccatctctgaggtgaggctggcaccg
gctaagtcaagtgctggctccgtggccggttatgcgggggctgtcggtggcggttccaag
aagcttagcgaggtggaggagttcgaggccaagaagctgcttaccggcattggtgagcta
gaccgggtgctgtgcggcgggctcaccacgggctcggtcaacatcatctcgggggatccc
ggcgccggtaagacgactattttgtcggatctggtgtcgcgcatgtctcagctgatgccc
tcgctctactgtaccgccgaagagtcgctgtcgcagtttaagaaccgggtcaatcgcctc
aggctggactgcaacgaggaaaacctctacctgatggccgagaccaatgtggaggcgatc
atcgccgagctggaggccaagcaggtcaagtttgcggtgatcgactcaattcaggccgtg
gtgacggaccttgccaacggcagtccgggttcgccatcccaggtcaagggcagtgcccag
gcactgacccaatactgtaagcagaacaatgtcaccatgttcttggtggcccacgtgaac
aagaacaacgagacggcaggcccgcagaccctgatccatatcgtcgattgcctgacgcat
ctcgagtgtaacgacggtcaagtacgcaccctgagggccaacaagaaccgtttcggcgac
gtagataccgtaggcatcttcaggatgaccgagcggggcatgttaagcgtcgataacccc
agcgagatcttcctctcggggtcgactaccgagtctcccggggcggccatcacctgtatc
cgcaagggcaatcgtaacctgttgctggagatccagtgcctgaccactgaggctgagggg
gagtttccccagcgagtctgtgttggcctgaacatgaaccgaatcaagatgttgaccggg
atcttgcgcaaacatacccgcaccaagatctatcacgacacctatttcaatctggtgggc
gggcttaagatagacgagtctgagacttgtatcgacctggcgctggtggctgcgctgctg
agcagcctcaacgagttcgtggtgccgcgcaccacctgcatcatgggcgagctgagtctc
aacggcgatgtgcgccccatcgacagcggcgtgcctagggtgaaggaggcggtgcagcat
ggctttaccgagatcttcattccgtttcgcaattatcataagtcgatggaaggtctgggc
gccaagattaaccccatcaagacgatacacgagctactggagttgatctgttaa
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