Shewanella loihica: Shew_2866
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Entry
Shew_2866 CDS
T00489
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slo
Shewanella loihica
Pathway
slo00061
Fatty acid biosynthesis
slo00071
Fatty acid degradation
slo01100
Metabolic pathways
slo01212
Fatty acid metabolism
slo02024
Quorum sensing
slo04146
Peroxisome
Module
slo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Shew_2866
00071 Fatty acid degradation
Shew_2866
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shew_2866
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shew_2866
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slo01004
]
Shew_2866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slo04147
]
Shew_2866
Enzymes [BR:
slo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Shew_2866
Lipid biosynthesis proteins [BR:
slo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Shew_2866
Exosome [BR:
slo04147
]
Exosomal proteins
Exosomal proteins of breast milk
Shew_2866
Exosomal proteins of breast cancer cells
Shew_2866
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GlcNAc-1_reg
Motif
Other DBs
NCBI-ProteinID:
ABO24732
UniProt:
A3QGY4
LinkDB
All DBs
Position
3398900..3400609
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AA seq
569 aa
AA seq
DB search
MNEQTYLQQVKALQAARWPKGTTREPIYPHGEKPVTEYLSAWARLNPTKVAIQFYGYELT
YAQLDEMSTRFANVLRGLGVGQGDGVAVFMPNCPQFHIAFLGILKCGAVHMPVSPLSKEM
ELRHQLGDSQPKVALCYDALLPTMRPVCQELGIEHIITTSYTDVRPRAITAVLPDLFEIP
KTPLADGIIDFFEAIDNASKEVLDYIPALDDLAAINYTSGTTGMPKGVMHTHRNMIGTMA
SYYPVTFGEVGPEGTDLVMLSFLPEFWIAGEDTGLLLPLYSGATLVLMARWDTKAFMELV
HHHKVNMTIMLIDSVDEILNHPHLHQFDLTSLTTVPCISFIKKLNRDYRQRWRELTGTTL
FEVAYGMTETHTCDTFTRGFQVDDMDLSFDPAFLGLPVPGTEIKICDFVTGELMPLGVEG
EIQIRTPTLLKGYWNKPDLNKNLFEEGGWYRTGDLGMITEEGFFRYLGRRKEMLKVNGMS
VFPTEVESMLGQHPAIASCGVVGRPDERKGQVPVAFVTLKPGFDETQESLQAWCVNAMAI
FKVPEIRIQERLPMTATGKIRKVDLEKSL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcaaacctatctccaacaggtcaaagcactccaagcggcaagatggcccaaa
ggcacaacgcgggaacccatctatcctcatggcgaaaagccggtcaccgagtatctctct
gcctgggcgagactcaaccctaccaaggtggccatccagttctacggctatgagctgacc
tacgcccagttggatgagatgagcacccgctttgccaacgtcctcagaggacttggcgtg
ggccagggtgacggtgttgccgtgttcatgcccaactgcccgcagtttcacatcgccttt
ctcggcatcttaaagtgcggcgccgtgcacatgccggtgagcccactgtcgaaagagatg
gaactacgccaccagctgggtgacagtcaacctaaggtcgccctatgctacgacgccctg
ctgcccaccatgcgtcccgtctgccaggagctgggcatagagcacatcatcaccaccagc
tataccgatgtcaggccccgcgccatcaccgccgtgctgcctgatctgtttgagatcccc
aagacccccttggcagatggcattatcgatttcttcgaggcgatagataacgcgtctaag
gaagtgctggactatatcccggcgctggacgatcttgcggccatcaactacaccagcggc
accactggcatgcccaagggcgtgatgcacacccaccgcaacatgataggcaccatggcc
tcttactatccggtcacctttggcgaggtcggccccgaaggcacagatctggtgatgctc
agcttcctgccagagttctggattgccggcgaagacacaggcttactgctccccctgtat
tcgggcgcgactctggtgttgatggcccgctgggacaccaaggcctttatggagctggta
caccaccacaaggtcaatatgaccatcatgctgatagacagcgtggatgagatcctcaac
caccctcatctccaccaattcgacctcacctcgctgaccacagtgccctgcatctccttc
atcaagaaactcaaccgagactaccgtcaacgttggcgcgagctgaccggcaccacactg
ttcgaggtggcctatggcatgacagagacccacacctgtgacaccttcacccgcggcttc
caggtggacgacatggatctctccttcgacccggcattccttggcctgcccgtgcccggc
acagagatcaagatctgcgactttgtcaccggcgagctcatgcccctgggcgtggaaggc
gagattcagatccgcacccctaccctgctcaagggttactggaataagccagatctgaac
aaaaacctgtttgaagagggtggctggtaccgcaccggcgacctgggaatgatcaccgag
gaaggcttcttccgttatctgggccgccgcaaggagatgctcaaggtcaacggcatgagc
gtattccccaccgaggtggaaagcatgctaggccaacatccggccatcgcctcatgcggc
gtcgtcggtcgccccgacgagcgcaaggggcaggtgcccgtggccttcgttaccctaaag
ccgggcttcgatgaaacccaagagtccctgcaggcctggtgtgtgaatgccatggccatc
ttcaaggtgccggagatccgcatccaggagagattacctatgaccgccaccggcaagatc
cgtaaggtggatctggagaaaagtttatga
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