Shewanella loihica: Shew_2897
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Entry
Shew_2897 CDS
T00489
Name
(GenBank) transcriptional regulator, LysR family
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slo03000
]
Shew_2897
Transcription factors [BR:
slo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shew_2897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ABO24763
UniProt:
A3QH15
LinkDB
All DBs
Position
complement(3435587..3436471)
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AA seq
294 aa
AA seq
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MDVKVFKTFLEVARTRHFGRAAENLYITQAAVSARIKQLESFFDSALFVRNRNSIQLTTS
GERLVPYAEVMVSTLEQAKNELALTNHKALQLTMAGTPNIWDAYLQHCLSKVTDAFGGYG
FLAEALSREQLNRNLLERTLDMAFAFDPLKSEELVCKQVADLILVLVSTRPCDQSEALSD
KYVYVDWGTRFASEHAERHYRMPPPYLRTSTGRIALDFILDKAGAAYLPLSIVEPFLQSK
QLYLVEGVEPWNRPIYLSYRKDSGSLEAIIKIEELVKEIDPLTAFSLQQIGQLG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaaagtatttaagacctttttagaggtggccagaacccggcatttcggccgt
gcggcggagaatctctatatcacccaggcagccgtgagcgcccgtattaagcagctggag
tccttcttcgactccgcgctgtttgtgcgtaatcgcaacagcattcaactcaccacctcg
ggtgagcgtctggtgccctacgccgaggtgatggtgagcaccctggagcaggcgaagaac
gagttggccctgaccaaccataaggcgttgcagctgaccatggcggggacgcctaacatc
tgggatgcctacctgcagcactgtttgagtaaggtgaccgatgccttcggtggctatggc
tttctggccgaggcgctgagtcgcgagcagctcaaccgcaacctgctggagcgaacccta
gacatggcttttgccttcgatccgcttaagtcggaggagctggtgtgtaagcaggtggcc
gaccttatcctggtgttggtctcgactcgcccctgcgatcagagcgaggcgctgagcgac
aagtatgtctatgtggattggggcacacgtttcgcctccgagcacgccgagcgccactat
cgcatgccgccaccttatctgcgtacctccaccgggcgtatcgcgctggattttattctg
gataaggcgggggcggcctatctgccgctgtctatcgtcgagccgttcctgcaatctaag
caactctatctagtagaaggggtggagccctggaatcgtcccatctatctctcctaccgc
aaagacagcgggtcgctggaggcgatcatcaagattgaggagctggtcaaggagatagac
cctctgaccgccttcagcctgcagcagataggtcagctgggctga
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