Shewanella loihica: Shew_2904
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Entry
Shew_2904 CDS
T00489
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
slo
Shewanella loihica
Pathway
slo00541
Biosynthesis of various nucleotide sugars
slo01100
Metabolic pathways
slo01250
Biosynthesis of nucleotide sugars
Module
slo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Shew_2904
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Shew_2904
Enzymes [BR:
slo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Shew_2904
Lipopolysaccharide biosynthesis proteins [BR:
slo01005
]
Lipid A
Shew_2904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABO24770
UniProt:
A3QH22
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All DBs
Position
complement(3443653..3444501)
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AA seq
282 aa
AA seq
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MSNKTIKLGSIEIANDKPFVLFGGMNVLESRDLAMQIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFQEIKDTFNLPLITDVHEPYQCQPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLTQMKAIDDLVKSFAPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaaccataaagttaggtagcattgaaattgcaaacgacaagccttttgtc
ctgtttggcggcatgaatgtgctcgagtcgcgagacctggccatgcagatcgcagagacc
tatgcggaagttactcagaagcttgggatcccttatgtgtttaaggcatcgttcgacaag
gctaaccgctcttcggtgaactcttaccgtggcccaggcatggaagagggactgaagatc
ttccaggagattaaagatacctttaacctgccgctgatcaccgacgtgcatgagccctac
cagtgccagccagtggccgaggtggtggatatcatccagctgcccgccttcctggcacgt
cagacggatctcgtggtagccatggccaagacaggcgccatcatcaacgtgaagaagcca
cagttcttggcgccccatgagatgcgtcatatcatcaccaagtttaacgaggcgggtaac
gacgagatcatcctatgtgagcgtggctcttgcttcggttacaataacctggtggttgac
atgctgggcatggatgagatgaagcagtcgggttacccagtgatcttcgatgcgacccac
gccctgcagcgtccaggcggacgtgccgatagcgcaggcggtcgtcgtgcccaggccacc
gagctggcccgtagcggcatggcgctgggtctggcgggtctgtttatcgaggcgcatccg
gatccagataacgccaagtgtgacggcccatgtgccttgccactgcatcagctggaaaat
tatttgacccagatgaaggcgatcgacgatctggtgaaatctttcgccccaatcgatacc
agcaagtaa
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