Shewanella loihica: Shew_2938
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Entry
Shew_2938 CDS
T00489
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slo01011
]
Shew_2938
Enzymes [BR:
slo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Shew_2938
Peptidoglycan biosynthesis and degradation proteins [BR:
slo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Shew_2938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
EDR1_CTR1_ARMC3_pept
Motif
Other DBs
NCBI-ProteinID:
ABO24804
UniProt:
A3QH56
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All DBs
Position
3477764..3478561
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AA seq
265 aa
AA seq
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MLMRNSNALSLLSFILLLVLAGCSSQSGRYKIADDVAPTDAPDVSKVEDAHPKFEPYSRG
GNRKEYTVLGKTYRVLDTGKGYQKTGIASWYGAKFHGHLTSNGETYDMYSMSAAHKTLPL
PSYVKVTNLANDKSVVVRVNDRGPFHDNRIIDLSYAAAHRLDMLKTGTAKVQLEVIYIEN
PESVALAALQETKLHYVQVIASSDKGRIDHLAQTLADQYQVQTRIQQSGNLYRLQLGPIG
RQQIAAQLHQTLQQNGYPQSYLVTE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgcgaaacagtaacgccctgtcactgctctccttcatcctgctattggttttg
gcgggctgctcgtcgcagagcggccgctataagattgccgacgacgtagcgccgaccgat
gcgcccgatgtctccaaggtcgaagatgctcatcccaagtttgagccctacagccgcggc
ggcaaccgcaaggaatatacggtactgggcaagacctaccgggtgctcgacacaggcaaa
ggctatcagaagacaggcatcgcctcctggtatggcgccaagtttcatggtcacctcacc
tccaatggcgagacctacgacatgtattccatgtcggcggcccataagacgctgccactg
ccaagctatgtgaaggtcactaacctggccaacgacaagtcggtagtggtgagggtcaac
gatcgaggcccctttcacgataaccgcatcatagatctctcctacgccgcggcgcatcgc
ctggacatgctcaagacgggcacggccaaggtgcagcttgaggtgatctacatcgaaaat
cccgagtctgtggctttggccgcactgcaggaaaccaaacttcactatgtgcaggtgatc
gcctcctcagataaggggcgcatcgaccatctggcacagaccctggccgatcagtatcag
gtgcagacccgtatccaacagagcggcaatctctatcgcctgcaactcggccccataggt
cgccagcagatcgccgcccagttgcatcagacactgcagcaaaacggctaccctcagagc
tatctggtgaccgaataa
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