Shewanella loihica: Shew_3045
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Entry
Shew_3045 CDS
T00489
Name
(GenBank) sugar-binding protein, putative
KO
K10439
ribose transport system substrate-binding protein
Organism
slo
Shewanella loihica
Pathway
slo02010
ABC transporters
slo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shew_3045
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Shew_3045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_3045
Transporters [BR:
slo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Shew_3045
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
PucR
Motif
Other DBs
NCBI-ProteinID:
ABO24911
UniProt:
A3QHG3
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All DBs
Position
3617527..3618633
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AA seq
368 aa
AA seq
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MAMLIKTLVANTLATTNLVIRKWIREAIVTRLLITLISLTLLATTTLSADVSAKTLRFAV
VPKFYGAFFDQSKLGCEAAARQLKDVECIYLGPEISSVRLQDKVIEQLIDQGIDGIAVAI
TQSKFLAENSLTKAKAAGIPVITYDSDFDAPTLAEHQDLRRAYIGTDNFAFGLALGEQLK
KLRPNGGTLIIQTGRPDSPNLNLRIMGIRSALSGKTYESPPGKRLQNDNGWTEIREPFSN
FDQLSQAVKQMESVMKGKPIKADSFIAVGGWPQNDEALYRKMIAPYKIKLNNKEIVVIIS
DAAPPQLAMLQDHLAHTNIGQSPYEMGRQAIFTLHKIVSDQAFEQIVFTPIKLCTPENAE
TCTKSVSD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggctatgcttatcaagacgttagttgctaataccttagctacgactaacctagttatt
aggaaatggattcgagaggctattgtgactcggttactcatcaccctcatctcgctgacc
ttactggccaccaccacgctcagcgccgatgtcagtgccaaaaccctgagattcgccgta
gtgccaaaattttacggcgccttcttcgatcagagtaagctcggctgcgaagccgccgcc
agacagctcaaggatgtcgagtgtatctatctggggccagagatctccagcgtgcgccta
caagataaggtgatcgagcagcttatcgaccaaggcatagacggcattgccgtggccatc
actcagtctaagtttctcgccgaaaacagtctcaccaaggccaaggccgccggcatcccg
gtgatcacctatgactcagatttcgacgccccaaccctggccgagcatcaagatctacgc
cgcgcctacataggcacagacaactttgcctttggcctggcactgggcgagcaactcaaa
aaactcaggcccaatggcggcaccctgatcatccaaaccggccgccccgactcccccaac
ctcaacctcaggatcatgggcattcgcagtgcactatctggcaaaacctatgaaagccct
ccgggcaagcggctgcaaaacgataacggctggacagagatcagagagcccttctccaac
ttcgatcagctcagtcaggcggtgaagcagatggagtctgtcatgaaaggcaaacccatc
aaggccgactcctttatcgccgtaggtggctggccgcaaaacgatgaggccctgtatcgc
aagatgatagcgccctataaaatcaagctaaataacaaagaaatagtcgtgattatctca
gatgcggcgccgccacaactggccatgctacaagaccacctcgcccataccaacataggc
cagagcccctacgagatgggccgccaggcgatcttcaccctgcacaaaattgtcagcgac
caggccttcgagcagatagtctttacccccatcaaactctgcacacccgaaaacgccgag
acctgcaccaagagcgtcagcgactga
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