Shewanella loihica: Shew_3081
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Entry
Shew_3081 CDS
T00489
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_3081
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_3081
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABO24947
UniProt:
A3QHJ9
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Position
complement(3657178..3659751)
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AA seq
857 aa
AA seq
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MTTHKNKGFGVSALSFAISLALTGSLASTQALADDQQAEASQNIEKIAVVGTRSAPRSIG
DSPVPIDIISSDDLKKNGSTDMIDMLVTTVPSFNSRAQPISDAATLIRPVNLRGLPSDST
LVLVNGKRRHRASVIAFQGGGINDGAQGPDISVIPSAALKQVEVLRDGAAAQYGSDAIAG
VMNFVLKDDAEGGSITVGQGEYYEGDGATTTIDANVGLPLSDAGFVNLSLQYKNADATSR
SMQRPDAANLIEQGNTFVQDPAQVWGNPEIKDDYSFFLNSGYDINDNARLYAFGNLSSRD
VVGGFYYRNPHNRGNVYSLDGGETLLVGAVNGDPSTCAVVPIPKNADGSDGNVLETDAYK
AMLADPNCFAMNQLRPGGYTPQFAGTVEDTSFFAGVKGELGAWNYDFSAGMGNNKSTFSL
KNSLNPSLGLDTPTDFETGAYEQAETTVNLDFSRMLTLGSVEDISFATGFEWREESFEIT
QGEEASWIAGPYADQGFNIGSHGFKGFGPESAGKNSRNNIGVYADMEAYLGERWLLGAAL
RYEDFSTFGDTLNYKLTAQFTATDDLSFRASHSTGFRAPTVGQENVVNTQTSIVNGDLIQ
TFIAPPTDPLSAFYGGKVLKPEESVSYALGAVFEHENLFVTLDYYNIEVTGRIAQSSQIE
VEAKDYDALRAAGVEFPELISAVTYYTNDFDTTTQGIDLVASYDTQLLSGDTKFSLAYGW
TDTSVDKYNPNTTDEGKVRRLEDGIPAHRATLTWAQSWDRFSMSLRGNYFGEYYATHADD
TSDWGSEMADSAVTVDLELSYQFLDSLTVSIGANNLFDQEAQKLKDGTRGELGAIYYESG
PFDYNGGYYYGRVNYRF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacataaaaataaaggtttcggcgtcagtgcgctgagttttgccatctctttg
gcattgacagggtcgttagcgagtacacaggcgttggccgatgatcagcaggcagaagcg
tctcagaatattgaaaaaattgccgtggtgggaacacgttctgcgccacgctctatcggc
gattcgccggtacctatcgatatcattagcagcgatgatctgaagaagaatggttctacc
gacatgatcgacatgctggtcaccactgtgccttctttcaactcccgtgcccagcccatc
agtgatgcggcaaccctgatccgtccggtcaacctacgtggtctgccgtcagacagcacc
ttggtattggtcaacggcaaacgtcgtcaccgcgcctcggtgatcgccttccagggcggt
ggcatcaacgatggtgcccagggcccggatatctcggtcattccgagtgcggcgctgaaa
caagtagaggtgctacgtgacggtgcggcggcgcaatatggttcagatgccatcgcgggt
gtgatgaactttgtgcttaaagatgatgccgaaggtggctctatcacggtcggccaaggc
gaatactatgagggcgacggtgccactaccactatcgatgccaacgtgggactccctctg
tcagacgctgggtttgtgaacctcagtctgcaatataagaatgccgatgcgaccagccgc
agcatgcagcgtccggatgcggccaacctgattgagcagggcaacaccttcgtccaagac
cctgcccaggtatggggtaaccctgagatcaaggatgactacagcttcttccttaactct
ggctacgacatcaacgacaatgcgcgtctgtacgcctttggtaacctctcttcgcgcgat
gtggtcggtggtttctactatcgtaacccccacaatcgcggcaacgtctactcgttagat
ggcggtgaaaccctgttggtgggtgcggtcaatggcgatccttctacctgtgccgtggtg
ccaattccaaagaatgcagatggtagcgacggtaacgtgctcgagacagatgcctacaag
gcgatgctggccgatcctaactgtttcgctatgaaccagctgcgtcctggcggttatacg
ccgcagtttgccggtactgtggaagacacctctttcttcgccggcgttaaaggcgagctc
ggtgcctggaactatgatttcagcgcgggtatgggtaacaacaagtcgaccttcagcctg
aagaattcgcttaacccgtcactgggcttagacacaccgaccgactttgaaaccggtgcc
tatgagcaggccgagaccacggttaacctggacttctcgcgcatgctcaccctgggcagc
gtcgaagatatcagcttcgcgacaggtttcgagtggcgcgaagagtcgttcgagatcact
cagggcgaagaagcctcttggattgccggcccatacgccgaccagggcttcaacatcggc
tctcacggcttcaagggtttcggcccagagtctgctggtaagaactcacgtaacaacata
ggcgtctatgccgacatggaagcctatttgggcgagcgctggttgcttggcgccgcgctg
cgttacgaggacttctctaccttcggtgacaccctgaactacaagctgactgctcagttc
acggctaccgacgatctctctttccgcgcgtcacacagcacaggtttccgtgcgccgacc
gtgggtcaggagaacgtggtcaacactcagacctccatcgttaacggtgacctgatccag
acctttatcgcgccgccaaccgatccgctgtcggccttctatggcggtaaggtgcttaag
cctgaggagtctgtcagttacgccctcggcgccgtgttcgagcacgaaaatcttttcgtg
actctggattactacaacatcgaggtgacaggccgtatcgcgcagtcaagccagattgaa
gttgaggcgaaagactatgacgcgctgcgcgccgccggtgtcgagttccctgagcttatt
tctgcggtgacttactacaccaacgacttcgataccacgactcagggtatcgatctggtg
gcctcatacgacactcagctattgtcgggcgataccaagttcagcctggcctatggctgg
actgatactagcgtcgacaagtacaacccaaataccacagatgagggtaaggtgcgtcgt
ctagaagatggtattccggctcaccgtgcgactctgacctgggcgcagtcttgggacaga
ttcagcatgtcgctgcgtggtaactacttcggtgagtactatgcgacccacgccgacgat
acctcggattggggctctgagatggccgattctgcggtgaccgtggatctggagctaagc
tatcagttcctcgatagcctgactgtctctatcggtgccaacaacctgttcgatcaggag
gcgcagaagctcaaagacggtacccgtggtgagctaggtgcgatctactatgagagtggc
ccgttcgattacaacggtggctactactatggtcgcgtgaactaccgcttctaa
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