Shewanella loihica: Shew_3088
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Entry
Shew_3088 CDS
T00489
Name
(GenBank) short chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
slo
Shewanella loihica
Pathway
slo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shew_3088
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GFIT
Motif
Pfam:
SCFA_trans
DcuC
ABG_transport
Motif
Other DBs
NCBI-ProteinID:
ABO24954
UniProt:
A3QHK6
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Position
complement(3669386..3670696)
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AA seq
436 aa
AA seq
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MLNKAAKPLVKLVDRYLPDPYIFVLLLTLLVFVAAMMVEQQSPLQLVTYWGQGFWALLSF
SMQMLLVLVAGYMLASSPPIKRLLDSIAALAKSAPQAIILVTLVSLLASWINWGFGLVVG
ALFAKALARQVKVDYRLLVASAYSGFVVWHGGLAGSIPLTIATKGHFAEDKIGIIATDNT
IFAGFNLALVAVLFVLIPLVNRFMLPSDDESIYVDRDKLAEPEVETEAITRPADYLENSR
LLAWAVGGAGLVYLGQYFFAAGGKLNLNIVNYLFLFLAIILHQTPRSLLTSLNEAIKGGA
GIVIQFPFYAGIMALMVQSGLAQSISSGFVAIASADSLPFWSFISAGIVNIFVPSGGGQW
AVQAPIMLPAAEALGADVARVAMAVAWGDAWTNLIQPFWALPVLAIAGLKARDIMGFCLM
QLIITGIVISIGLTWF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcttaataaggccgcaaaacctctggtcaagttggtcgaccgctatctgcccgacccc
tatattttcgtcttactcctcactctgctggtgtttgtcgccgccatgatggtggagcaa
cagagcccgctgcaactggtgacctactggggccaaggcttctgggcgctgctcagcttc
tcgatgcagatgttgctggtgctggtggccggttacatgctggccagctcgccgcccatt
aaacgcctgctagatagtatcgccgccctggccaagagtgcgccccaggcgatcatacta
gtgactctggtgtcgctgctcgccagctggatcaactggggcttcggcctggtggtcggc
gccctgtttgccaaggcgctggcgcgtcaggtgaaggtggattatcgcctgctggtggcc
agtgcctattcgggcttcgtggtctggcacggcggcctggcgggttcgattcccctgacc
atagccaccaaggggcatttcgccgaggacaagataggcatcatagccacagacaatacc
attttcgccggctttaacctggcgctggtggctgttctgttcgtgctgatccccctggtt
aaccgcttcatgttgccaagcgatgatgagagcatctatgtcgacagggacaagctagct
gagcccgaggtcgagaccgaggcgatcacccgcccggcggattatctggaaaatagccgc
ctgctggcctgggccgtgggtggggcaggcctggtctacctggggcaatacttcttcgct
gccggtggtaaactcaacctgaatatcgtcaactacctgtttctgttcctcgccatcatc
ctgcatcagacgcctcgcagcctgctgaccagtcttaatgaggcgatcaagggcggcgcc
ggcatagtgatccagttccccttctatgcggggatcatggcgctcatggtgcagtcgggt
ctggctcagagtatttcgtcggggttcgtggccatcgccagcgccgacagcctgccgttc
tggagtttcatcagcgccggtatcgttaacatcttcgtgccgtccggtggtggccagtgg
gcggtgcaggcacctatcatgttgcccgccgccgaggcgctgggcgcagatgtggcaagg
gtcgccatggcggtggcctggggcgatgcctggaccaatctgatccagcccttctgggcc
ctgcccgtgctggcgatcgcaggtcttaaggcgcgggatattatgggcttctgcctgatg
cagctgatcatcacaggcatagtgatcagtatcggtctgacctggttctag
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