Shewanella loihica: Shew_3118
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Entry
Shew_3118 CDS
T00489
Name
(GenBank) conserved hypothetical protein
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3584
Mvb12
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABO24984
UniProt:
A3QHN6
LinkDB
All DBs
Position
complement(3702599..3706270)
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AA seq
1223 aa
AA seq
DB search
MPSLNRIVLINTHLPGVVELALDGHTNICGTNASGKTTLQRLVPVFYGEYPSRVVPSTRD
SFERWYLPHDSSYIIYEYRRDDGLLTQAVLASAGDGKGVNYRFIGKGFELEDYVKSQQGE
SILCHNMAELGREMKRAGVAVTNLLNTREYRAIIQNDRTLLSTGSNRSELRAYARQFSLC
QHEHTLRHIEKLAKAVHSKEGKMETIKSMIAAILEEDGVNPPSSRLNPQRVEAWIRESQL
IQGFEQIRPEFDKLEQEFNQLLSAEQRLAGLKRGYGKDEAQEIERQELNQQRSKDLGNKL
RQLDDEWKELRDELNLDLSAAKGDVAKIEHELDIIEDQHAGFLDADIEQAKLDLEQLPSW
RASLENLTERHKLQTEKHQDIEAAYNARRSKIGENLNRELEQLDKEQDKHREARDKQQEV
GREELAALEQSWREQMEAGRAKHNEQEYQLKLTAAELQMQVNGVTYSEEEKLTLAVFDER
ISRADEEQEACNAMVDRLAGEERKLRAKRDQANESLRQAGLRVIERQGALDELHQVLFPQ
SHTLLEYLRKEVDGWEESIGKLINPELLHRSDLHPAKSAGGDSFCGVELDLKALTTPEYA
ASEQELRGRYSEAEEALANAKQLQAEAEEALVAINAELDKLNRELTFAKTAYKNSRDDLR
RLFDEKRAEQEKINQALSARKADSQKRLARLDSEMKQLKAQHQEWIDEQNEQALEARMEK
KAYWQEVVGALDVQLSQVKQNINDRRHAAKTEQKACEQWYKDELKSRGVDEAKIVKLKQE
IRDLESSISKAEQRRSEVLRFDDWYQHTWLARKPKLQTELSQVKMAVTELSQQLTTKANE
IKHQRQQYDSERKQSDAIQVEASENLTKLRAVMRKLAELKLPSSQDEMQGGLTERLRQGE
ELLLRRDQLMGSVKQYIEHFDSVIASKSGSSLSETWERAREESSFVNDKGIRLLDYRKLV
PQLEQLLNVMVPQAIMGLREQGRNFGIDLTAFYDVLADIDRRIASQSARITREVGEELFL
DGVSESAVRIRSRISELEFWPELEEFVKAFKQWKAEGFADLPDEHYTSSMRRALDIIGRA
ALTGGIAKLLEIELRLKEGNSDLVIRTDRQLNESSSHGMAYLILCKFLLAFTRLLRGRAD
VTIHWPIDELGTLHHGNVKKIFDACENNNISVLGAFPNPESEVLNLFANRYIINKQTKKL
QVVKPQVNPIADKLSQRFAKEAV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcttaaatcgtatcgtgctgatcaatacgcacctccccggcgttgtggaactc
gccctcgatggacacaccaacatttgtggtaccaacgcctcgggcaagaccaccttgcag
cgtctggtgcccgtgttttacggcgaataccccagccgcgtcgtgccctcgacccgtgac
agcttcgagcgttggtatctgccccacgattccagctacattatctacgagtatcgccgc
gacgatggcctgctgacccaggcggtgctggcctctgccggtgatggcaagggcgtcaac
tatcgcttcatcggcaaaggctttgagctggaagactatgtgaagtcacagcagggggag
tcgattctctgccataacatggccgagctgggacgtgagatgaaacgcgccggggtggcg
gtaaccaacctgctaaatacccgcgaatatcgcgccatcatccaaaacgatcgcaccctg
ctaagcaccggcagcaaccgcagcgagctgagggcctacgcccgccagttctccctgtgt
cagcacgaacacacgctgcgccacatagagaagttggccaaggcggtgcactccaaagaa
ggcaagatggagaccatcaagtcgatgatcgccgccatcctggaggaggatggggttaac
ccgccgagctcacgcctcaacccgcagcgggtcgaggcttggatccgcgagagccagctg
atccagggcttcgagcagatccgccccgaatttgacaagttggagcaggagtttaaccaa
ctgctgagcgcggagcagcgtctggccggcctgaagcgcggctatggcaaggatgaggcc
caggagatagagcgtcaggagctaaatcagcagcgctcgaaagatctcggcaacaagctg
cgtcagctcgacgacgagtggaaggagctgcgcgacgagcttaacctggatctctctgcc
gccaagggcgacgtggccaagatagagcatgagctggatatcatagaagatcagcacgca
ggttttctcgatgccgatatcgagcaggccaaactggatcttgagcagctgcccagctgg
cgtgccagcctggagaacctgaccgagcgtcataagctgcaaaccgagaagcaccaggat
atcgaggcggcctacaacgcccgtcgcagcaagataggcgagaacctcaaccgcgagctg
gagcagctagataaggaacaagataagcatcgtgaagccagagacaagcagcaggaggtg
ggccgtgaggagctggccgccctcgagcaaagctggcgtgagcagatggaggcgggccgc
gccaagcacaacgagcaggaataccagctcaagctgacggcggccgagctgcagatgcag
gtcaacggcgtcacctacagcgaagaagagaagctgaccctggcggtgtttgatgagcgc
atctcccgcgccgacgaggagcaggaggcgtgcaacgccatggtggatcgcctggcaggc
gaggagcgcaagctcagagccaagcgggatcaggccaacgagagcctgagacaggcaggg
ctaagggtcatcgagcgtcagggcgcgctggatgagctgcatcaggtgctcttccctcag
tctcataccctgcttgagtacctgcgcaaggaggtcgacggctgggaggagagcataggc
aagctgataaaccctgaactactacatcgcagtgatctgcaccctgccaagtcggccggc
ggcgacagcttctgcggcgtcgagctggatctcaaggcgctgaccaccccagaatatgcc
gcctcggagcaggagctcaggggccgttacagtgaggccgaggaggcgctggccaatgcc
aagcagctacaggccgaggcagaagaggccctggtagccatcaacgccgagctggataag
cttaatcgcgaactcaccttcgccaagacggcctacaaaaatagccgcgacgatctgcgc
cgcctgtttgacgagaagcgtgccgagcaggagaagatcaatcaggcgctgagcgctcgc
aaggcagattcgcagaagcgtcttgcccgtctcgacagcgagatgaaacagctcaaggct
cagcaccaggagtggatcgatgagcaaaacgagcaggcgctcgaggcgcgcatggagaag
aaggcctactggcaggaagtggttggtgcattggatgttcagctctcccaggtgaagcag
aatattaacgatcgccgtcatgcggccaagacggagcagaaggcctgcgagcagtggtat
aaggatgagctgaaatcccgcggcgtcgacgaagccaagatagtcaagctcaagcaggag
atccgcgatctggagagcagcatcagcaaggcggagcagcgccgcagcgaagtattgcgt
ttcgacgactggtatcaacacacctggctcgcgcgcaagcctaagctgcagaccgaactg
agccaggtcaagatggcggtgaccgagctgagtcaacagctcaccaccaaggccaacgag
attaaacatcagcgtcagcaatatgatagcgagcgcaaacagtctgacgccatccaggtg
gaggcctcggagaacctgaccaagctgcgcgccgtgatgcgcaagctggccgagctgaaa
ctgccatcgagccaggatgagatgcaaggtggtctcaccgagcgtctgcgtcagggcgaa
gagttattgctgcgccgggaccagttgatgggctcggtgaagcagtatatcgagcatttc
gactcggtgatcgccagcaagtcgggttccagtctgtcagagacttgggagcgcgcccgc
gaggagtctagcttcgtcaacgacaagggcattcgcctgctggactatcgcaagctggta
ccgcaactggagcagctgctcaacgtcatggtgcctcaggcgatcatgggcctgagagag
caggggcgtaacttcggtatcgacctgacggcattctacgacgtgctggcggatatcgac
cgccgcatcgcctcccagagtgcccgcatcacccgcgaggtgggtgaagagctgttcctc
gacggggtgagcgagtcggcggtgcgcatccgttcgcgcatcagcgagctggagttctgg
cccgagctggaggagttcgtcaaggcatttaaacagtggaaggccgagggcttcgccgac
ttgccggacgagcactacaccagcagcatgcgccgcgccctggatattattggccgcgcc
gccctgaccggcggtatcgccaagctgctggagatcgaactgcgcctcaaggagggtaac
agtgatctagtgatccgcaccgaccgccagctcaacgagtcttcgagccatggtatggcc
tacctgatcttgtgtaagttcctgttggccttcacccgtctgctgcgtggccgcgccgac
gtgaccattcactggccgatcgacgagctgggcaccctgcaccacggcaacgtgaagaag
atcttcgatgcctgtgagaacaacaatatctcggtattgggcgccttcccgaaccctgag
tctgaggtgcttaacctgtttgccaacagatacatcatcaacaagcaaaccaagaaatta
caagtggttaagccacaagttaaccccattgccgataagctgagccagcgttttgccaag
gaggctgtgtaa
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integrated database retrieval system
