Shewanella loihica: Shew_3180
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Entry
Shew_3180 CDS
T00489
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slo03009
]
Shew_3180
Enzymes [BR:
slo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Shew_3180
Ribosome biogenesis [BR:
slo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Shew_3180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABO25046
UniProt:
A3QHU8
LinkDB
All DBs
Position
3785529..3786245
Genome browser
AA seq
238 aa
AA seq
DB search
MRLAQYLALTGRCSRRAASRLIRNGRVSLGDRLAKHTDSIELIETPTGTQASLSVCVDGE
PLPPIADKAYWIFNKAVGTDCRLLAEDTTSLIHLLPRQPRLYPVGRLDKDSRGLLLLTND
GELTQRLMHPSFAHHKRYHVRLDRPFDDDFVVKMAAGVSYKDVTTQPCQVTRLGQDSFEI
VLTQGLNRQIRRMSKTLGHKVIDLKRVAIESLTLGDLPEGEMRPLTQAELDELWCDLA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgcccagtatctggccttaactggccgctgctcgcgccgcgccgcatcaaga
ctgatccgcaacgggcgagtcagcctgggcgatcggctcgccaagcacacagacagcatc
gagctgatagagacccccacaggtacacaggcatcactcagcgtctgtgtcgatggcgag
cctctgccccccatcgccgacaaggcctactggatattcaacaaggcggtggggacagac
tgccgcctgctggcagaggatacaaccagcttgatccatctgctgccacggcagccgcgt
ctctaccccgtgggacggctggataaagactccagggggctgctgctactcactaacgat
ggtgagctgacccagcgcctgatgcaccccagttttgcccaccacaaacgctaccatgtc
aggctagacaggcccttcgatgatgattttgtggttaagatggcagcaggggtcagctat
aaggatgtcaccacacagccctgtcaggtgactcgcctaggccaggacagcttcgagata
gtcctcacccagggactcaaccgccagatccgccgcatgagtaagaccctcggccacaag
gtaatagaccttaagcgcgtcgccatcgagtccttaaccctgggcgatctgccagaaggc
gagatgcgaccgctaacccaggccgaattagacgagctttggtgcgatcttgcctaa
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