Shewanella loihica: Shew_3269
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Entry
Shew_3269 CDS
T00489
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
slo
Shewanella loihica
Pathway
slo00052
Galactose metabolism
slo00511
Other glycan degradation
slo00600
Sphingolipid metabolism
slo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Shew_3269
09103 Lipid metabolism
00600 Sphingolipid metabolism
Shew_3269
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Shew_3269
Enzymes [BR:
slo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Shew_3269
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Glyco_hydro_2_N2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
ABO25135
UniProt:
A3QI37
LinkDB
All DBs
Position
3908831..3912061
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AA seq
1076 aa
AA seq
DB search
MINRFSLLQRLSYTLAFSLVFGLVVSNPALARDRWQDHTLFEVNKLAPHASFFGYESEPL
ALLDEMDRSQLYLDLNGRWRFHLAKNPDATPKEFAAPEFDASHWGSIQVPGNFETQGYGH
AIYLDERYPFDTKWPDAPSDHNPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGR
EVGYSQGAKTPAEFDITPYLQAGDNLVAMQLIRWSDASYLESQDMLRMTGIEREVYLYAT
PKQRIEDIQVVTHLNEDLTRAKLAIRVDIASHQPGVRALELEARLLDPQGKPVAKANQRL
SLKGDAKPVFSQTLISPKLWNAEMPNLYRLILTLKTEKGETLQVASQQIGVRKIAIENGQ
LKVNNKAITIRGVDRHETDPQTGHVVSRETMELDIRLMKQNNINAVRSSHYPNHPYWLSL
ADRYGLYVIDEANIESHPLAIDDKTQLGNEMSWLPAHQARIERMVERDKNHPSVIIWSLG
NEAGEGKLFERLYQWIKRRDPNRPVQYEPAGEAPYTDIVAPMYPSIERIREYAERASDRP
LIMIEYAHAMGNSVGNLQDYWDVIEAYPQLQGGFIWDWVDQALAFSNDLGQRYWAYGKDY
HPDMPTDGNFLNNGLVDPDRNPHPHLSEVKKVYQPIKLRDFKVEGDKASVNLINGFDFAS
TSGLSLNWTLQKDGKIIASKRQAMPILSPGEQARVSLTLPGKQSLSAPFEYHLLLEVLVD
TPRPLLPSDLRIAFEQFALPRFGTKAAYQVKKNQAKISEDSGSYRLTSGELSYEFDKRSG
WLTQIYQEGEPQLKAPLMANFWRAPTDNDLGNQMPDWAGAWQDAATELEVTAIDADLALG
LTISQTHAEKGFSLRTRYSLDNAGRLMVDSQFIPGNKPLADLPRFGFSTRLGFEHRYLSY
FGRGPEETYADRQSGNPLGWYALPIEQTYHRYPRPQETGQRTQVRYAAVTDQRGQGWLAI
ANQAHAGEQDRKEADEVATLQTSLWPFAQADIDFRRGDAQDSASGLVAVTRNHGAEIPLR
EFVTWNIDYRQMGVGGDTSWGRPVHGPYRIKAEPIRFGFTLMPVSSDDDIRTLARQ
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccgcttctctctgctacagagactctcctatacacttgcattctctctagtc
tttgggctggtagtctccaacccggcgctggcaagggatcgctggcaggatcacacccta
ttcgaggtcaacaaactggcgccccatgccagcttcttcggttatgaatcagagcctctg
gcgctgctcgacgagatggaccgtagccagctttatctggatctcaacggccgctggcgc
tttcatctagccaagaatcccgatgccacccccaaagagttcgccgctcccgagtttgat
gccagccactggggtagcatacaggtgccgggcaatttcgagacccagggctacggccac
gccatctacctcgacgagcgctatcccttcgacacgaagtggcccgatgcgccgagcgat
cacaaccccacaggcctctaccgcaagacctttaccctgcccgcccattggcagcaaaaa
caggtgtttatccacataggcgcggcgcgctcggccctcaccctgttcgtcaatggccgt
gaggtcggctatagccagggcgccaagaccccggctgagttcgacattaccccctacctg
caagcgggcgacaatctagtcgccatgcagttgatccgctggagcgacgccagttacctg
gaaagccaggatatgctgcgcatgacagggatagagcgcgaggtctacctctatgccacc
cccaagcagcgcatagaagatattcaggttgtcactcatctaaacgaggatctcacccgc
gccaagctcgccatcagggtcgatatcgccagccaccagccaggggtaagagcccttgaa
ttggaggcgcgcctgctggatccccagggcaagccggtcgcgaaagctaaccaacgcctg
agcctgaaaggcgatgccaagcccgtctttagccagaccctaatatcccccaagctgtgg
aacgccgagatgccgaatctgtaccggctcatcctgaccctcaagacagaaaaaggagag
acgcttcaggtcgccagtcagcagataggcgtgcgcaagatcgccatcgaaaacggccag
cttaaggtcaacaacaaggcgatcaccatacgcggcgtggatcgtcacgagacagatccc
caaaccggccatgtggtcagccgagaaaccatggagctggatatccgcttgatgaagcaa
aacaatatcaatgcggtgcgctccagccactaccccaatcatccctactggctcagcctc
gccgaccgctatggcctgtatgtgatcgatgaggccaatatagagtcccacccgctggcg
atagacgacaagacccagctgggcaacgagatgagctggctgcccgcccatcaggcgcgc
atcgagcgtatggtcgagcgcgacaagaaccacccctcggtgatcatctggtctctgggt
aacgaggccggtgaaggcaagctgtttgagcgcctctatcagtggataaaacggcgggat
cccaatcgacctgtgcagtatgaaccggcgggcgaggcgccttacacggatatcgtcgcc
cccatgtatccctccatcgagcggatacgcgaatatgccgagcgtgccagcgaccgaccg
ctgatcatgatcgaatacgcccacgccatgggcaactcggtaggcaacctgcaagactac
tgggatgtgatagaggcctatccccagctgcagggcggcttcatctgggactgggtggat
caggcgctggccttcagcaacgatttaggtcagaggtactgggcctacggcaaggactat
caccccgatatgcccacagacggcaacttcctcaacaacggcctggtggatcccgaccgt
aacccccatccccacctgagtgaggtgaaaaaggtctatcaacccatcaagttgagagac
tttaaggttgagggtgataaggcctcagtgaatctcatcaacggcttcgacttcgcctcc
acctcaggcctgagcctgaactggacgctacaaaaagatggcaagatcatcgccagcaag
cgccaggccatgccgatactctcccccggcgagcaggcccgtgtcagcctcaccctgccg
ggcaaacagagcctcagcgcccccttcgagtatcacctgctactcgaggtactggtcgat
acccctagacccctgctgccgagcgatctccgcatcgccttcgagcagttcgccctgccg
cgcttcgggactaaagccgcttatcaagtaaagaaaaaccaggccaagatcagcgaagat
agcggcagctatcgcctcacctcgggtgagctgagctatgagtttgacaaacgcagcggc
tggctgacccagatctaccaagagggagagccccagcttaaggcgccactgatggccaac
ttctggcgcgcgccaaccgacaacgacctgggtaaccagatgccggattgggcaggggcc
tggcaagacgcggcaacggagctagaagtcacggcaatcgacgccgacctagcccttggc
ctgaccatcagccagacccatgccgagaagggctttagcctgcgcacccgctatagcctg
gataatgccggacgcctgatggtcgacagccagtttatccctgggaataagccgcttgcc
gatctgccccgcttcggcttcagcaccaggctaggctttgagcacagatacctgagttac
tttggccgcggcccagaggagacctacgccgatcgccagtcgggcaatcccctgggctgg
tacgccctaccgatagagcaaacctatcacagatacccaagaccccaggagactgggcag
cgcactcaggtgcgctacgccgcggtgacagatcaaaggggtcaaggttggctggcgatc
gctaaccaggctcacgcaggagaacaggacagaaaggaggcagatgaggtcgccacccta
cagaccagcctctggcccttcgcccaggccgacatagattttcgccgcggcgatgcccag
gactcggcctcgggtctggtggccgtcacccgcaaccacggcgccgagatcccgctaagg
gagttcgtcacctggaacatcgattaccgccagatgggcgtcggcggtgatacctcctgg
ggccgtcctgtgcacgggccctaccgcatcaaggccgagccgatccgcttcggctttacc
ctgatgccagtgagcagcgatgacgatatccgcaccctggcaagacaataa
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