KEGG   Shewanella loihica: Shew_3310
Entry
Shew_3310         CDS       T00489                                 
Name
(GenBank) ABC transporter-related protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
slo  Shewanella loihica
Pathway
slo02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:slo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Shew_3310
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:slo02000]
    Shew_3310
Enzymes [BR:slo01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     Shew_3310
Transporters [BR:slo02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    Shew_3310
 Other transporters
  Pores ion channels [TC:1]
   Shew_3310
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C AAA_21 SMC_N DO-GTPase2 T2SSE RecA AAA_23 AAA_30 SbcC_Walker_B nSTAND3 AAA_22
Other DBs
NCBI-ProteinID: ABO25176
UniProt: A3QI78
LinkDB
Position
3950727..3951458
AA seq 243 aa
MTDLILKAENLAKSYKSRAVVQDVSLTVKTGQIVGLLGPNGAGKTTTFYMVVGLVQSDKG
RIFIDDDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRSDLNNDGREEEL
EHLLEEFHITHIRDSHGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK
IIEQLKNRGLGVLITDHNVRETLDVCEKAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ
FKL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgacagacctgatcttgaaggcggagaacctcgccaagagctataagagtcgtgccgtt
gtccaagacgtgagcctcacggtcaagaccgggcaaatcgtcggcctgctggggccaaac
ggcgccggcaagaccaccaccttttacatggtcgtcggcctggtacagagcgacaagggc
cgcatctttatcgacgatgacgacctgacgctagacccaatgcacctacgcgcccgcaaa
ggcataggctacctgcctcaggaagccagcatcttccgtaagctctcggtgcgggacaac
atcatggccgtgctccagacccgcagcgatcttaataacgatggccgcgaagaggagctg
gaacacctgctggaagagtttcacatcacccatatccgtgacagccacggcatggcgctc
tcgggcggtgaacgtcgccgggtggagatcgccagggccctagccgccaaccctaagttt
attcttctcgacgagccgttcgccggggtcgatcccatctcggtaatcgacatcaagaag
atcatcgaacagctcaagaatcgcggcctgggggtgttgatcaccgaccataacgtgcgc
gagacattagacgtctgcgagaaagcctatatcgtcagccatggtaatctgatcgccgag
ggcacacccgccgaaatcttagacaaccagcaagtacgagcagtgtacttaggtgaacaa
ttcaagctatag

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