Shewanella loihica: Shew_3340
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Entry
Shew_3340 CDS
T00489
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_3340
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_3340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABO25206
UniProt:
A3QIA8
LinkDB
All DBs
Position
3983615..3985672
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AA seq
685 aa
AA seq
DB search
MALRLSFLTLSIGTALLTLPFAQAQEAAFEIIEVHGAHQGSYTSVTPEAQAPVSDISGLL
TQLPGTAVNGNGPLTGIAQYRGLFGDRVNTQVNGVSLAGAGPNAMDTPLSYASLINSERI
EMHRGIAPVSAGTNTVGGSIKVIESQASFNDTQGRIAAQYQGNGGQSHLGAKVNVGGKNH
ALLVYGDLMHGDEDMKSGDDLRLSPTGYDKQIIGGQYRLNLSDKGLDDESIAIGYQHLET
TEAGTPALPMDIDFIRTDRVKLEGEHRLDTWDLNWHLAFSDARHGMDNFSERQKPESANA
RYNNAESQSYDMALTLGRDAWLFGLDSQLSEHNSLITDPTKPMFRVDNFNKVQDDTYSAF
AQWQQDIDQWHWQLGARVKHYRTDADEVSHSMAGAMPAIKVLMDRYNQADRTQAQTGLDL
VINGRYRVNEELTWILGLARKQDSASYQQRYLWIPMQSTGGLADGRTYVGKMDLDLETAY
QLELGADFNRQGLSISPRVFLHRIDDYIQGVKSTDPAVIMAANMMGSQDPMEFANVDAQL
LGMDINASYEITDQWQLDLLASYVSGERRDIDDNLYRIAPPKVNLGLNFREGNWSARIEG
VMVAAQDKVSESQSEQASAGYGLVNLVLAYDRQNWLVKAGVNNLFDIDYEDHLGGYNRVF
NADLTPGQRMPGTGMNAWLTGEYRF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgtctctctttccttacgctctcaatcggcactgccttgctgactctaccc
tttgctcaggctcaagaagccgccttcgagatcatcgaagtccatggtgcccaccagggt
agctatacctcggtgacgcccgaggcccaggcacccgtcagtgacatcagcggtctgctc
acccagctcccaggcacggccgtcaacggtaacggcccgctgaccggcatcgcccagtat
cgcggcctgttcggcgacagagtcaatacccaggtcaatggtgtctccctcgccggcgca
ggccccaatgccatggacactccgctgagctatgccagcctgatcaacagtgagcgcatc
gagatgcaccgcggcatagcccccgtctcggccggcactaacacggtaggcggcagcatc
aaggtgatcgaatcccaggccagctttaacgatactcagggtcgcatcgccgcccagtat
caaggcaatggcggccagagccatctgggggccaaggtcaatgtgggtggaaagaaccac
gccctgctggtctatggcgacctcatgcatggagatgaggatatgaaatccggcgacgat
cttcgcctctctcccaccggctacgacaagcagatcatcggcggccaataccgcttaaac
ctcagcgacaaggggttggacgatgagtccatcgccatcggctatcaacatctggaaacc
acagaggcgggcaccccggcgttgcctatggatatcgacttcatccgtaccgacagggtg
aaactcgaaggtgagcacaggctcgatacctgggatctcaactggcatctggcctttagc
gatgccagacacggcatggacaacttcagcgaacgtcagaagccagagagtgccaacgcc
cgttacaacaacgccgagagccagagttatgatatggcgctgacactgggcagagatgcc
tggctgtttggcctcgacagtcagctgagtgaacacaactcgctgatcacagatcccacc
aaacccatgttcagggtcgacaacttcaacaaggtgcaggacgatacctatagcgccttc
gcccaatggcaacaggatatcgaccagtggcattggcagctcggcgccagggtgaaacac
taccgcaccgatgccgatgaggtcagccactcaatggctggcgccatgccggccatcaag
gtgttgatggacagatataaccaggcggatcgcacccaggcgcagacggggctggatctg
gtgatcaacggccgttatagggtcaatgaggagttaacctggatactcgggctggcccgc
aaacaggacagcgccagctatcagcagagatacctgtggatcccgatgcaatcgaccggt
ggactcgccgacgggcgcacctatgtgggcaagatggatctggatctggaaaccgcctat
cagctggagctgggcgccgacttcaaccgccagggactaagcatcagcccacgagtcttc
ctgcatcgcatcgacgactatattcagggggtgaagtcgaccgatcccgcggtgatcatg
gccgccaacatgatgggcagccaagatccgatggaatttgccaatgtcgatgcccagcta
ctggggatggatattaacgccagctatgagataacagatcagtggcagctggatctccta
gccagctatgtcagcggcgagcgccgcgacatcgacgacaacctctaccgcatagcaccg
ccaaaggtaaatttggggctcaacttcagagaaggcaactggtctgcccgcatcgaaggg
gtgatggtggcggctcaggacaaggtatcagagagtcaatccgagcaggccagcgcgggc
tacggcctggtcaacctggtactggcctacgacagacaaaactggctggttaaggctggg
gtcaacaacctgttcgatatcgactatgaagatcatctcggcggctacaaccgggtgttc
aatgccgacctaacgccggggcaacgcatgccgggcactggcatgaatgcctggctcacc
ggggagtatcgcttctaa
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