Shewanella loihica: Shew_3420
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Entry
Shew_3420 CDS
T00489
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
Organism
slo
Shewanella loihica
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ABO25286
UniProt:
A3QII8
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Position
4075470..4076951
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AA seq
493 aa
AA seq
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MVNSLFGRILLLTSACVLLLFLGFWQWSSLSQQHSQRLVQQSLHRELATHMAEINPLLSQ
GIASDAALKEAFHDLMLLGPSFEIYTLDTQGKVVAFDAREEQIKTHRVDITKIHSFLKGN
TLPILGTDPRSDGQQKIFSASPLTGPNGTLSGYLYVIIGGEAFDSWQSLIQAKDLPERWG
VALGGWALFTLILFALLLRYLTRPLNRLTQALGELEHKPIDQPLALPLAPSRSQEMAQLN
GQINRLLEEVAQKQRQVTAQQAAKQEFLLHLSHDLKTPLTTLLGYLDTWLLSPADARDDS
LLQYAAASGQKLQQLLAQMLELAALENGQIKANMRRVSLQSILDELNQTFTPKAKRAEVS
LRLGQGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEIAVYPQTLASGSYLVIQD
SGSGMQPEAIAALQHTPSPSQPELYYCRGETLPQLGVGLAIVRQLLARLGCRIEVQSATD
RGSRFMIALPRYR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacagcctgtttggtcgcatcctgctgcttaccagcgcctgtgtcttgctgctg
tttctcggcttctggcagtggtctagcctgagtcagcaacacagccagcggctggtgcaa
cagtccctgcacagggaactggcgacccacatggccgagatcaacccgctgttgtcacag
ggaatcgcctcggacgccgccctcaaggaggcctttcacgacctcatgttgctggggccc
agcttcgagatctacaccttagacactcaaggcaaggtggtcgccttcgacgccagggag
gagcagatcaagacccacagggtggacatcaccaagattcattccttcctcaaggggaat
accctgccaatcctgggcacagatcccaggagtgatggccagcagaagatcttctccgcc
agcccacttacaggcccaaatggtaccctcagcggctacctctatgtgatcataggcggc
gaagccttcgatagttggcagtcactcatccaggccaaagatctgccggagcgctggggc
gtcgccctgggtggctgggcactgtttaccctgatcttgtttgccctgctgctgcgctac
ctgacccggcccctcaatcgcctcacccaggccctgggcgagctggaacacaaacccata
gatcagcccctcgccctgcccctggcgccgagccgcagccaggagatggcccagctcaat
gggcagatcaatcgtctgctagaagaggtagcccagaagcagcgacaggtcacggcgcag
caggctgccaagcaggagttcctgctgcacctgtcacacgatctcaagacgccgctcacc
accttgctgggatacttagatacctggctgctgagcccggccgatgcgcgcgacgacagc
ctgctgcagtacgcggccgcctcggggcagaagctacagcagctgctggcgcagatgctc
gagttggcggcgctggagaacggtcagatcaaggcgaacatgcgccgcgtctcgctgcag
tcgattctcgatgaactcaaccagaccttcacccccaaggctaagcgggccgaggtcagc
ctccgcctaggccagggtgagagtgagggcgagagtgagttcctctatacggatcctcag
ctcatgagccgggtgctcaacaacctgctggacaacgccctacgccacacaccgccaggc
ggtgagatagccgtctatccccagacgctggcctcgggatcttatctggtgattcaagac
tcgggcagcggcatgcaaccagaagccattgccgccctgcaacatactcctagcccaagc
caacccgagctctactattgccggggcgaaacgctgccgcagctaggcgtcggcctggcg
atcgtcaggcagctattggccagactcggctgtcgtatcgaggtgcagagtgcaaccgat
cggggcagccgattcatgatcgcactgccccgatatcgatga
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