Shewanella loihica: Shew_3438
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Entry
Shew_3438 CDS
T00489
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slo02044
]
Shew_3438
02035 Bacterial motility proteins [BR:
slo02035
]
Shew_3438
Secretion system [BR:
slo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Shew_3438
Bacterial motility proteins [BR:
slo02035
]
Pilus system
Pilus assembly proteins
Shew_3438
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_22
AAA_16
AAA_14
AAA_29
AAA_7
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABO25304
UniProt:
A3QIK6
LinkDB
All DBs
Position
4105375..4107084
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AA seq
569 aa
AA seq
DB search
MPSTGLHLGLSTLFIRKGLLSEEQLSEAVDLSRKNKQPLVSTLIATKVLSAREVAELCYE
EYGTPLLDLNEFDISSIPEAFLNKKLIEKHKCLPLFKRGNRLYIGTSDPTNIAALEDFQF
SAGLHAEAILVEDDKLTVALEKVLEEDISALDLDGIDEDSLSGIEITDTDKRQEEQQGDA
SDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPVNLSGRISA
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTIWGEKIVMRILDSSSAQLGI
EKLGYENDQRKLYEEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVE
INLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLS
TLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCTECRQPEEVPEHELLKLGF
TQAQIDEGFTVYKPVGCDLCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIATQAKEQ
GMRDLRESGLRKVIAGVTSIAEINRVTSF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaaccggtctacatttgggattatcgaccctttttattcgcaaaggactactt
agcgaagagcaattgtcagaagccgtagatctatcccgtaaaaacaagcaacctctagtc
agtactttaattgctaccaaagtgctttcagctagggaagtggcagagctatgctatgaa
gagtatggtacgcctttgttggacttaaatgaatttgatatcagcagcattccggaagca
ttcctaaataaaaagctaattgaaaaacacaagtgtcttccattattcaagcgtggaaac
cgtctatatatagggacttccgatcctaccaatattgcagcattagaagactttcaattt
agtgcagggttacatgcggaggcgattctcgttgaagatgacaaactaacagtcgctctt
gagaaggttttagaagaagatatctctgcgctcgatttagatggcatagatgaagattca
ctatccggcattgaaattacagataccgacaagcgccaggaagaacaacagggcgacgca
agtgacgatgctcctatcgtcatatatataaacaagatactcaccgacgccatacgtaaa
ggcgcgtcagacttacacttcgaaccttatgaaaaacgctatcgtattcgatttcgcatc
gatggtattttacatgaagtatcagaacctcctgttaacttatcaggacgaatttcagcg
cgtctaaaagtaatgtcaaaactcgatatcgccgaacgtcgagttcctcaagatggccga
attaagatgaagctgtctcgcactaaatctatcgattttcgtgtcagcaccttgccgaca
atttggggcgaaaagatcgtaatgcgtatcttagactcctcttctgcccaactcggaatt
gaaaagctcggctacgaaaatgatcaacgcaaactctatgaagaaatgttggcaaaacct
caaggcatgatcttggtaaccggccctacaggctcaggtaaaacagtatccctttataca
ggccttaatattctcaataccgaagagcgcaacatttcaaccgctgaagacccagtcgaa
attaacttagaaggcgtcaatcaggttcatattaacttgaaggctggactcaccttcgcc
tcggcgctgcgctctttcttacgtcaagatcccgatgtggtcatggtgggtgagatacgt
gacttggaaaccgccgaaattgccattaaagcagcacaaaccggtcacttggtactttcg
acccttcataccaactcggctgccgaaacgctaactcgtctgataaatatgggcgtccca
ggttacaacattgccagctcagttaacctaattatcgcccaacgtctcgccagaaggctt
tgtaccgaatgccgtcaaccggaagaagtccccgaacacgaactactgaaactcggtttt
acacaagcacaaattgatgaaggctttaccgtctataagccagttggctgtgacctttgc
tctggcggttataaggggcgtgtcggtatttatgaggtgatgaagatgtcagatgagatt
gcccgtactattatggaaggaggaaattctttgcaaattgccacccaggctaaagagcaa
ggaatgcgagatctcagagaatctggactacgaaaggttattgccggcgtaacaagtatt
gccgaaataaatcgtgtaactagcttctaa
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