Shewanella loihica: Shew_3439
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Entry
Shew_3439 CDS
T00489
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slo02044
]
Shew_3439
02035 Bacterial motility proteins [BR:
slo02035
]
Shew_3439
Secretion system [BR:
slo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Shew_3439
Bacterial motility proteins [BR:
slo02035
]
Pilus system
Pilus assembly proteins
Shew_3439
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
YhdP
Motif
Other DBs
NCBI-ProteinID:
ABO25305
UniProt:
A3QIK7
LinkDB
All DBs
Position
4107121..4108389
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AA seq
422 aa
AA seq
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MATASLAKTSTKKQKAAKAQPKVVTFEWKGTNRDGKKTSGELRGTSPAEIKAQLKSQGVN
PKVVKKKAEPLFKSDPKIKAMDIAMITRQIATMLAAGVPIVTTLEMLGRGHEKPRMRELL
GTIVADVQSGIPLSDSLKPHRQYFDDLYVDLVGAGEHSGSLDAVFDRIATYREKAEALKS
KIKKAMFYPAAVIVVAIAVTTLLLLFVVPQFEDIFAGFGAELPAFTQMIVSISRWLQSSW
YFFVIGIVVSIWSFKKAHLKSAGFRNKVDELVLKIPIIGEILHKAAMARFARTLATTFAA
GVPLIDGLESAAGASGNYVYRSALTKVRTEVMSGMQMNVAMRTTGLFPDMLIQMVMIGEE
SGGLDDMLNKIANIYEMQVDDAVDGLSSLIEPMMMVVIGTLVGGLIIGMYLPIFQMGNVV
GG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcatcgcttgctaaaacatcaactaaaaagcaaaaagcagccaaagctcaa
cctaaagtggtcacttttgaatggaagggaactaaccgcgacggaaaaaaaacctcaggc
gaattgagagggacgtcacctgccgaaataaaagcacaactaaaatcgcaaggcgtcaac
ccaaaagttgtcaaaaagaaagctgaacctctatttaagagtgatccaaaaataaaggca
atggatatcgccatgatcacacgccagattgcgacaatgttggcggcaggtgtccccatt
gtaacaacccttgagatgctagggcgcggtcacgaaaagcctagaatgcgcgagttactt
ggaacaattgtggctgatgtgcagtccggtataccactatccgactctttaaaaccccac
agacaatattttgatgatctttacgttgatttggttggtgctggagaacactcaggttcc
ctagatgccgtatttgacagaattgcaacgtacagagaaaaagctgaagcactaaaatca
aaaataaaaaaggcaatgttctatcctgctgccgttatcgttgttgctatagctgttaca
acactattattgttatttgttgtaccgcagtttgaagacatatttgctggttttggagct
gagctcccggcatttacacaaatgattgtaagtatctcgcgatggcttcaatcttcttgg
tatttttttgtaataggcatagttgtctctatttggtcatttaaaaaggctcatttaaaa
tcggcgggattccgaaataaagtagatgagctagtgctgaaaatcccaattattggtgaa
attttacacaaggcggcaatggcaagatttgcgagaactttagcaacaacctttgcagca
ggtgttcccctaattgatggactagaatctgccgccggagcatctggtaactatgtctac
cgcagcgcacttacgaaagttcgtacagaggtaatgtctgggatgcaaatgaacgtcgct
atgcgtaccacaggacttttcccggacatgcttatccaaatggttatgataggtgaagaa
tctggtggcctcgatgatatgctaaataagatagcgaacatatatgaaatgcaagtagat
gacgcagttgacggattatctagcttaattgaaccaatgatgatggtcgtcattggtaca
ctcgttggggggttaattatagggatgtacctccctatcttccagatgggtaatgtcgtc
ggcggctaa
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