Shewanella loihica: Shew_3457
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Entry
Shew_3457 CDS
T00489
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
slo
Shewanella loihica
Pathway
slo00300
Lysine biosynthesis
slo00550
Peptidoglycan biosynthesis
slo01100
Metabolic pathways
slo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Shew_3457
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shew_3457
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Shew_3457
Enzymes [BR:
slo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Shew_3457
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Paralog
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
VPS35L_C
Motif
Other DBs
NCBI-ProteinID:
ABO25323
UniProt:
A3QIM5
LinkDB
All DBs
Position
complement(4139913..4141283)
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AA seq
456 aa
AA seq
DB search
MIPLKLSELAKVLNAKHIGDDLSVSKVSSDSRVVDAQTLFVALKGERFDAHDFAAKAVMD
GASALLVERELPIAAPQLIVANSQKAMGQIGAHVKQCVAPKSVALTGSNGKTSVKEMVAT
ILSTQHQVLYTAGNFNNEVGVPLTLLRLEPQHEYGVFELGANHLGEINYTSSLVQPDVAM
VNNVASAHLEGFGSLEGVAKAKSEIFLHLAKDGVAVINADDAFADVMRRAAASHTQLSFS
SQGNPADVSADELSADALGCYRFRIAYLDEQRTVSLPLSGRHQVSNALAATSICLALGLS
LDEIVQGLMRLQPVKGRMQPTRLGRFLLIDDTYNANPASVGAAIDWLQEIEGNRCLVLGD
LGELGDNASLLHRQLGEKAKQQGIDALYSLGELSRASSEAFAGKHFTDLDALVVDLVSYF
NQLTGKVTVLVKGSRSARMERVVEALIAAFERKELF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacttaaactgtcagagctcgccaaggtactgaatgccaagcatatcggcgac
gatttaagcgtcagcaaggtatcgagcgatagccgggtggtggatgcacagactctgttt
gtcgccttaaaaggtgaacgtttcgatgcccacgattttgcggccaaggcggtgatggat
ggcgccagcgccctgctggtggagcgtgaactaccgattgccgcgccgcaactcatagtg
gctaacagccagaaagccatgggccagattggtgcccatgtgaagcagtgcgtcgcgccc
aagagcgtggccctgaccggctcgaacggcaagaccagcgtcaaggagatggtggcgact
atattgtcgacccagcatcaggtgctctataccgcgggcaacttcaacaacgaagtcggc
gtgcccctgaccctgctgcgcctcgagccgcaacacgaatatggcgtgttcgaactgggt
gccaatcatctcggtgagattaattacacttcatctttagtgcaacccgatgtggcgatg
gttaataatgtcgcctcggcgcatttagagggttttggctcgctcgaaggcgtggctaag
gccaagtctgagatcttcctccacctggctaaggatggcgtcgccgtgatcaacgcagac
gacgcatttgccgatgtgatgcgccgcgcggccgctagccatacccagttgagtttttca
tcccaggggaatcctgcagatgtcagcgccgatgagctcagcgccgacgccttgggctgt
tatcgctttcgaatcgcgtatctggatgagcagcgtaccgtcagcctgccgttgtcgggc
cgtcatcaggtgagtaacgccctggcggcgaccagcatctgtttggcgctgggattgtcg
ctggatgagatagttcaagggcttatgcggttacaacccgtgaaggggcgtatgcagccg
acgcgtctgggacgtttcttgctgatagacgacacctataacgccaatccggcctcggtg
ggagcggcaatcgactggcttcaagaaattgaaggaaatcgctgtttagtgctgggcgat
ttgggcgaattaggtgacaatgcgtcccttttacatcggcagctgggcgagaaggccaag
cagcaggggatcgatgccttgtattcactgggagagttgagtcgggcgagtagcgaagct
ttcgccggcaagcatttcaccgacttagatgcattggttgttgatttagttagttatttt
aaccagttaaccggcaaggtgactgtgttagttaaggggtctcgaagcgccagaatggag
cgggttgtcgaggccctcattgccgcctttgagcgcaaggagttgttttaa
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