KEGG   Shewanella loihica: Shew_3561
Entry
Shew_3561         CDS       T00489                                 
Name
(GenBank) nitrogen metabolism transcriptional regulator, NtrC, Fis family
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
slo  Shewanella loihica
Pathway
slo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:slo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Shew_3561
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:slo02022]
    Shew_3561
Two-component system [BR:slo02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   Shew_3561
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA AAA_16 HTH_30 FleQ AAA_7
Other DBs
NCBI-ProteinID: ABO25427
UniProt: A3QIX9
LinkDB
Position
4252021..4253430
AA seq 469 aa
MTEKVWVLDDDSSIRWVVERALKGAKISCASFAAAESLWQALEQTQPQVIISDIRMPGTD
GLTLLDRLQLHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAIGLVERALSH
AKEQSPKVISQPEVKAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAGAL
HKHSPRKDKPFIALNMAAIPKELIESELFGHEKGAFTGAANVRQGRFEQADGGTLFLDEI
GDMPLDVQTRLLRVLADGQFYRIGGHSPVQVDVRIIAATHQNLESLVAKGDFREDLFHRL
NVIRVHLPPLSQRREDIPQLARHFLATAAKEISVEPKILTKATADTLASLPWPGNVRQLE
NTCRWLMVMASGQEILPQDLPPELLTPSNSHDSSPQAGSGGWQEALTQWIDQRLSEGESD
LLTQIQPAFEKILLETALKHTKGHKQEAAKRLGWGRNTLTRKLKELEMD
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgacagaaaaagtttgggttctcgatgatgatagttcgatacgttgggtcgtcgaacgg
gcgctcaagggcgccaagataagctgcgccagcttcgccgccgccgaatccctgtggcag
gcattggaacagacccaaccccaggtgatcatctcggatatccgtatgccgggtaccgat
ggcctgaccctgctggatcgcctgcagctgcactatccccatattcccgtgatcatcatg
acggcccattccgacctcgacagcgccgtcagcgcctatcaggcgggagccttcgagtat
ctgcccaagccattcgatatcgacgaggcgatcggcctggtggagcgtgccctgagccat
gccaaggagcagtcacccaaggtcattagccagcccgaagtcaaggcaccggagatcatc
ggcgaggcacctgccatgcaggaggtatttcgcgccatcggccgcctgtcacgctcctcc
atcagcgtgttgatcaacggtcagtcgggcacgggtaaggagctggtcgccggtgccctg
cataaacacagtccgcgcaaggacaagcccttcatcgccctcaacatggcggcgatcccc
aaggaactgatcgaatctgagctgttcggccacgagaagggcgccttcaccggcgccgcc
aacgtgcgtcagggccgcttcgagcaggccgatggcggcacactgtttctcgatgagatc
ggcgacatgccgctggatgtgcagacccgtttgctgcgggtattggcagacggtcagttc
tatcgtatcggtggtcactcgccggtgcaggtggatgtgcgcatcatagccgcgacccac
cagaacctggagtctctggtagccaagggggattttcgtgaggatctcttccaccgcctc
aacgtgatccgggtgcatctgccgccgctatcacagcgccgggaggatattcctcagctg
gcacgccacttcctggctaccgccgccaaggagatcagcgtcgagcctaagatactcacc
aaggcgaccgccgacactctggccagcctgccctggcccggtaacgtgcgtcagctggaa
aacacctgtcgctggctgatggtgatggcctcgggccaggagatcttgcctcaggatctg
ccgcctgagctgctgacacccagcaacagccacgacagctcgccccaggcgggcagcggt
ggctggcaggaggctctgacccagtggatagatcaacgcctgagcgaaggcgagagcgat
ctgctgacccagatacagcctgcgtttgaaaagatattgctagagacggcgctgaaacac
accaagggacacaaacaggaagcagctaagcgcctgggctggggtcgtaataccctgacg
cgtaagctgaaagaactcgagatggattga

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