Shewanella loihica: Shew_3589
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Entry
Shew_3589 CDS
T00489
Name
(GenBank) transcriptional regulator, LysR family
Organism
slo
Shewanella loihica
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ABO25455
UniProt:
A3QJ07
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Position
4287146..4288138
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AA seq
330 aa
AA seq
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MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA
HGLKPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGP
LLNNAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTD
HQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTT
VPDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLPFDFHSLAYVLLWHERNDDEP
GHKWIRETICKRVAQAVNQPEDALSASGSA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgacaacttggcgcgtatcgacctcaatctactggtgatgttgcaggtgtta
ctggaggagcgcagcgtaacccgcgccgccagccgcctgcatctgagtcaatctgccctg
agcaagagcctcaaccgactgcgcgataccctgggggatcccctgtttatccgcaccgcc
cacggcctcaagcccacggcccacgccgccctgctgggccagcagctgcctgacatgttg
cagggactctaccagctgactcagccaccgagtttcaatcccgccagcagcaggcgtcag
ttctccttcgccatggtggagagtgcctatgagacgctgatcccctacttcatcggccct
ttgctcaacaacgcccccaatctcaggctggactcctacctgtggacggagaagtctctc
tcctccctgcagaagggccagatagatttcggcatcacgggcagagacatcaacccacag
tcggatctcatcatcgacaggctgccagaagggatcgctcaccagacactgtttaccgat
catcaggtctgcctggtgcgccaaggccaccccatgctgccggccattcgtaatcatcaa
tgggatctcgacatctatctggagatgtcccatgtgcaggtacgctgcgagggcaacgag
tggtgggcgctggactatttcctggcgaaatcgggacagagacgtcacctgagcaccaca
gtgcccgacttctatggcgccgccagcgtctgcgcccatagcgatcttatctttaccctg
ccctccagcttcgccgcccacgcccgcaagctctatgccttggaggagctgccgctgccg
ttcgacttccactccctggcctatgtactgctgtggcacgaacgcaacgatgacgaaccc
gggcataagtggatccgcgagaccatctgcaagcgtgtcgcccaggcggtcaaccagccc
gaagatgcgttatctgcatccggttcagcttag
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