Shewanella loihica: Shew_3592
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Entry
Shew_3592 CDS
T00489
Name
(GenBank) Sel1 domain protein repeat-containing protein
KO
K07126
uncharacterized protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Shew_3592
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GFIT
Motif
Pfam:
Sel1
DUF4145
TPR_27
TPR_1
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ABO25458
UniProt:
A3QJ10
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Position
complement(4289980..4291398)
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AA seq
472 aa
AA seq
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MLSDIELVSQFSHDLGEDYRVAKSYVRDVPTQALLHVRSFTHRLTDKLAASQQLVFDSPN
LYDRIELLNRQRVINVRLTRALHRLRSDGNRGAHPEKYHLTAEALEQLAEKAIERLVKLV
EDLYPLLCNEPAPEYRFEPFDAFAGRDLCYRAVMENDPQAQYLVGMSLKTRALMQKEQEQ
ALHDEAEQELDPQSEANFKQAAHWFALAAPHLPEAKYEHGVSLLHGYAGKADVAAGESAI
IAAAKAGVVNAMALLGYFYLVGSEQISIDTQLAYRYLQAAADREQSEAMANLGVLYYQQA
NYAQAFHYISSAAQAGFPHAQYHLALMLARGEGCEADPLASEQWMAEAAEQGQLDAMLHC
AQQMLNNENALGNDFSLAERYLREAVKYGHSVPAMIELSIALADGILGRIDVVGSAALLR
MARQRGNEREREVIAPLWESLSLQIDKVLSVTQDAEEQRALQRARELLSDPA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgctcagcgatatcgaactggttagccaattttcgcacgacctgggtgaagactaccgt
gtggccaagagctatgtgcgtgacgtgccgacccaggcactgctgcacgtgcgtagcttc
acccatagattgaccgataagctggcggcctcccagcagctggtcttcgacagccccaac
ctctacgaccgaatcgaactgctcaaccgtcagcgggtgatcaacgtgcgtctgacccgc
gccttgcacaggctgcgcagcgacggcaaccgtggggcccatcccgagaaatatcacctc
accgccgaggcgctcgagcagctggccgagaaggctatcgaacgtctggtcaagctggtg
gaagatctctatccgctgctctgcaatgagcctgcccccgagtatcgcttcgagcctttc
gatgccttcgccgggcgggatctctgttatcgtgccgtgatggaaaacgatcctcaggcg
cagtatctggtgggcatgtcgctcaagacccgcgccctgatgcagaaggagcaggagcaa
gccctgcatgacgaggcggagcaagagcttgaccctcagagcgaggccaacttcaagcag
gcggcccactggtttgccctagcggcgccccatctgcccgaggcgaaatatgaacacggc
gtcagcctgctgcacggctatgctggcaaggcggacgtggcggcgggcgagagtgccatc
atagccgcggccaaggccggggtagtgaatgccatggccctgctgggctatttctatttg
gtcggtagtgagcagatcagcatagatactcagctagcctatcgttacctgcaggcggcg
gcggatcgcgagcagtcggaagccatggctaacctcggcgtgctctactatcagcaggcc
aactatgcccaggcgtttcactatatctccagtgccgctcaggccggattcccccatgcc
cagtatcacctggcgctcatgttggcgcggggcgagggctgtgaggccgatcccctggcc
agcgagcagtggatggccgaggccgccgagcagggacaactcgatgccatgctgcactgt
gcccagcagatgctcaacaacgagaatgccctgggcaatgacttctctctggcggagcgc
tacctgagagaggcggtgaaatatggccacagcgtgccggccatgatagagctgagcatc
gccctggccgacggcatattgggacgcatcgacgtggtgggctcggcggcgctgctgagg
atggcgcgccagcgtggcaatgaacgcgaacgtgaggtgatagccccactgtgggagtcg
ctgtctctgcagatcgataaggtcctgagtgtcacccaagacgccgaggagcagagagcc
ctgcagcgcgcacgggagctgctgagcgatcccgcctaa
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