Shewanella loihica: Shew_3752
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Entry
Shew_3752 CDS
T00489
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_3752
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_3752
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
ABO25618
UniProt:
A3QJH0
LinkDB
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Position
complement(4468492..4469742)
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AA seq
416 aa
AA seq
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MDQELRAQVSLWLTHFGIDSPSDGVSTGVMVFACLLIAFIGYVVVKRGVVSTMNIVIQRS
KVRWDDIFMQHRVLEKLAKLVPALILNILLPLALVEHPLLSSLADRLLDVAIVILFVRAV
YSVLDAGNEIADVNQISRRLPIKSFVQLLKLFMFFVAIVISISVLAEQSPVYFLSGLGVA
TGLVMLVFKDTILGFVAGIQLAANRMVSPGDWIQMDKYGADGAVEEVSLTTVKVQNWDKT
ITMIPAYALVSDAFKNWRGMSESGGRRIKRAVNIDIDSIAFLSDEQLKRLGKINLLKEYL
ARKEVEIAEFNAKIQDGDMPVNSRNLTNVGTFRAYLLEYMRKHPKVHQEMTLLVRQLAPT
TEGLPIEIYIFTNDTRWAFYEDIQADIFDHIYAILPQFNLRAFQAPTGADVRSLKG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggatcaagaattacgcgcacaggtgtcgctctggttgacccacttcggcatagatagc
ccctcggacggggtctctaccggcgtcatggtctttgcttgtctgttgatcgccttcatc
ggctatgtagtggtgaaacgcggcgtggtgagcacaatgaacatagtgatccagcgctct
aaggtgcgttgggacgacatcttcatgcagcacagggtgctggagaagctggccaagttg
gtacctgccttgatcctcaacatcttgctgccgctggccttggtggagcatccgctgctt
agcagcctggcggatagattgctggatgtggcgatagtgatcctcttcgtgcgcgccgtc
tacagcgtgctggacgcgggtaacgagatcgccgacgtcaaccagatcagccgccggttg
ccgatcaagagtttcgtgcagctgctcaagctgtttatgttcttcgtcgccatcgtcatc
tcgatctccgtactggccgagcagtcgccggtctacttcctcagcggcctgggtgtcgcc
acgggcctggtgatgttggtgttcaaagacactatcttggggttcgtggccggcattcag
ctggcggccaaccgcatggtcagcccgggtgactggatccagatggataagtacggcgcc
gatggcgcggtggaagaggtctcgctgaccacggtcaaggtgcagaattgggacaagaca
atcactatgatccccgcctatgccctggtgtccgacgccttcaagaactggcgcggcatg
tcagagtctggcggccggcgcatcaagcgggcggtgaatatcgacatcgattccatcgcc
tttctcagtgatgaacagcttaagcgcctgggtaagatcaacctgctcaaggagtacctg
gcccgcaaagaggtggagattgccgagttcaacgccaagattcaggatggtgacatgccg
gtgaatagccgcaacctcaccaatgtcggtaccttcagggcctatctgctggaatatatg
cgtaagcaccctaaggtgcatcaggagatgaccctgctggtgcgtcagctggcgccgacc
acagaggggttacccatagagatctatatctttaccaatgatacccgctgggcgttttac
gaggatattcaggcggatatcttcgaccatatctacgcgattctgccgcagtttaacctg
cgggccttccaggcaccgaccggcgccgatgtgcgcagtcttaagggttag
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