Synoicihabitans lomoniglobus: PXH66_01095
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Entry
PXH66_01095 CDS
T09702
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
slom
Synoicihabitans lomoniglobus
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slom03032
]
PXH66_01095 (gyrB)
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_01095 (gyrB)
Enzymes [BR:
slom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PXH66_01095 (gyrB)
DNA replication proteins [BR:
slom03032
]
Prokaryotic type
DNA Topoisomerases
PXH66_01095 (gyrB)
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PXH66_01095 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
WED65444
UniProt:
A0AAE9ZYC0
LinkDB
All DBs
Position
complement(295447..298020)
Genome browser
AA seq
857 aa
AA seq
DB search
MSDTPDPVPPPENKAISGSYDSSKLGKLEGLEAVRKKPGMYIGGTDERALHHCVSEVLDN
SVDEHLAGHCHKIDVAIHVDGSISIRDDGRGIPVDIHPQYGIPGVEMVLTTLHSGGKYGQ
GGYKFSGGTHGVGAKCVNAVSEWFEVEVSRNGEVHHMKFERGKTVKKLAVIGKARGTGTY
VTFKPDPEIFRETTVFIGDRIAQRLRELAFLNSGLQINFVDERPAVPKPVTFLYKNGVVE
FVRQLNEGKQVVHPDPVRITKQTELMIDDKPNEIHVEVVLQYNDSFNDQVLCYTNTVHNP
DGGTHLSGFRSALTRAINQFSRANKLLKDKDPQITGDDVREGLAAVISIKHSDPKFESQT
KVKLLSPEVESTVGSSSYEGLMQYFETNPQVAKRLIDKSLNAARAREAARKARETIRKGA
LSSGGLPGKLADCSERDPAVAELYIVEGDSAGGSAKQGRDRRYQAILPLRGKLINSEKAR
LDKVLSNEEIRTLITAIGTGIGFADDAGGFNVDKARYHRIIIMTDADVDGSHIRTLLLTF
LYRQMKGLIERGYVYIAQPPLYRIKRKRREQYIDNDEQLNRILLELGSEDVTFTRLADNH
TFTGEQIDSIVEHLAALEKIGAGVTRYGASITEYLDRHDPETLALPRYIARIREGNNESH
EFLRDEDERAEFNRNQGLDADLDTEETAEGEEPAAPVASSTTSIGLSGKSGALTRRVTLH
EIFESTEMTKLLQAIRKAGLEIKRFHPTEEPRYTVTENTGQKGEAVTELHAPLEVLSHIR
TLGRKGLSIQRYKGLGEMNPKQLFETTMDPDKRRLLKVNIADAAKADALFTLLMGDEVPP
RRQFIEDNALNVSYLDV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacacctgatccggttcctcctcccgaaaacaaagccatctccggctcctac
gactcctccaaactcggcaagctcgaaggcctcgaggccgtgcgcaagaagcccggcatg
tatatcggcggcaccgatgagcgtgcgctgcatcactgcgtttccgaggttttggataat
tcggtcgacgaacatctcgccggccattgccacaagatcgacgtcgccatccacgtcgac
ggctccatctcgatccgcgatgacggccgcggcatcccggtggacattcatccccaatac
ggcattcccggcgtcgagatggtgctcaccaccctccactccggcggtaaatacggccag
ggcggctacaaattctccggcggcacccacggcgtcggagccaagtgcgtgaacgccgtt
tccgaatggttcgaggtcgaggtctcccgcaatggcgaggtccaccacatgaagttcgag
cgcggcaaaacggtgaaaaaactcgccgtcatcggcaaagctcgcggcaccggcacctac
gttacgttcaaacccgaccccgagattttccgcgaaaccaccgttttcatcggcgaccgc
atcgcccaacgcctgcgcgaactcgccttcctcaactcgggcctgcagatcaacttcgtc
gacgagcgcccggccgtgccgaagcccgtcaccttcctctacaagaatggggtggtcgaa
ttcgtccgccagctcaacgagggcaagcaggtcgttcatcccgatcccgtccgcatcacc
aagcagacggagctcatgatcgacgacaaacccaacgagatccacgtcgaggtcgttctc
caatacaacgactccttcaacgatcaggtgctctgttacaccaacaccgtccacaacccc
gacggcggcacccacctttccggtttccgcagtgccctcacccgcgccatcaaccagttc
tcccgcgccaacaagctgctcaaggacaaggacccgcaaatcaccggcgacgacgtgcgc
gaaggcctcgccgccgttatctcgatcaagcactccgatcccaagttcgagtcccagacc
aaggtcaaactgctctcccccgaggttgaaagcaccgtcggttcctcgtcctacgagggg
ctcatgcaatatttcgagaccaacccgcaggtggccaagcgcctcatcgacaaatctctc
aacgccgcccgcgcccgcgaggccgcccgcaaggcccgcgaaaccatccgtaagggcgcc
ctctcctccggcggtctgcccggcaaactcgccgactgctccgaacgcgatcccgccgtc
gccgagctctacatcgtcgagggtgattccgccggtggttccgccaagcagggccgcgat
cgccgttaccaggccatcctcccgctccgaggcaagttgatcaactccgagaaggcccgc
ctcgacaaggtgctctccaacgaggaaatccgcaccctcatcaccgccatcggcaccggc
atcggtttcgccgatgacgccggcggcttcaacgtcgataaggcccgctaccaccgcatc
atcatcatgaccgatgcggacgtcgacggctcccatatccggaccctcctgctcaccttc
ctctatcgccagatgaagggcctcatcgagcgcggctacgtctacatcgcccaaccgccg
ctctaccgcatcaagcgcaagcgccgggagcaatatatcgacaacgacgagcagctgaac
cgcatcctgctcgaactcggttccgaagacgtcaccttcacgcgcctcgccgacaaccac
accttcaccggcgaacagatcgacagcatcgtcgaacacctcgccgccctcgaaaagatc
ggggccggcgtcacccgctacggcgcctcgatcaccgaatacctcgaccgccacgatccc
gaaaccctcgccctgccccgctacatcgcccgcattcgcgaaggcaacaacgagtcccat
gagttcctgcgcgacgaagacgagcgcgccgaattcaaccgcaatcaaggcctcgacgcc
gatctcgacaccgaagaaaccgccgagggcgaagagccggccgcccccgtcgccagcagc
accacctcgatcggtctctccggcaagtccggcgccctcacgcgccgcgtcacgctgcac
gaaatcttcgagtccaccgaaatgacgaagctccttcaggccatccgcaaggccggcctt
gagatcaaacggttccatccgaccgaagaaccgcgctacaccgtcaccgaaaacaccggc
caaaaaggcgaagccgtcaccgaactgcacgccccgctcgaagtgctctcacacattcgc
acgctcggccgcaagggcctctccattcaacgctacaaggggttgggggaaatgaacccc
aagcagctcttcgagaccaccatggaccccgacaaacgccgcctcctcaaggtcaacatc
gccgacgccgccaaagccgacgccctgttcaccctgctcatgggcgacgaagtccccccg
cgccgccagttcatcgaagacaacgccctcaacgtctcctacctggacgtgtaa
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