Synoicihabitans lomoniglobus: PXH66_02105
Help
Entry
PXH66_02105 CDS
T09702
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
slom
Synoicihabitans lomoniglobus
Pathway
slom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PXH66_02105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slom03021
]
PXH66_02105
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_02105
Enzymes [BR:
slom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PXH66_02105
Transcription machinery [BR:
slom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PXH66_02105
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PXH66_02105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WED65640
UniProt:
A0AAE9ZV55
LinkDB
All DBs
Position
535208..536212
Genome browser
AA seq
334 aa
AA seq
DB search
MPKRLGKFELPNKLTKVEEGSTDTYGKFIAEPFEAGYGHTIGNSLRRVLLSSIEGAAIAS
IKIDGVNHEFQSVDGIVEDVTDIVLNLKKVLIVSSANADEVVLSLNVDREGPVTAADIQA
DANITIVNPDQLICTLDKPQSFAAEVTIKTGRGYCPGEANKKEEQAIGVIPIDSLFSPVK
LVKYSVEATRVGQITDYDKLILEIWTDGRINPDDALKQAGSILKHHLDVFDRVSEESFEF
DNQQSEVSEEQNKLRKLLNMSVNEIELSVRAANCLNNANITTVGELAMKTEQEMLKYRNF
GKKSLNEIKDKLEALGLSLGMKFDERLLDSKKEI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcctcggtaagttcgaactacctaacaaactcacgaaggtggaggaaggc
tccaccgatacctatggcaagttcatcgccgagcctttcgaggctggctatggccacacc
atcggtaactccctccgccgggttctcctgagctcgattgagggcgccgccatcgcctcc
atcaagattgacggagtcaaccacgagttccagagcgtcgacggtatcgtcgaagatgtc
accgacatcgtgctcaacctcaagaaggtgctcatcgtttcgtccgccaacgccgacgaa
gtggtgctctccctcaacgtcgatcgtgaaggccccgtcaccgctgccgatatccaggcc
gacgccaacatcacgatcgtcaatcctgaccagttgatctgcacgctcgacaagccgcag
tcctttgccgccgaggtcacgattaaaaccggtcgtggttactgcccgggcgaagccaac
aaaaaggaagagcaagccatcggggtcatcccgatcgattcgctcttctccccggtcaag
ctcgtcaagtattcggtcgaggccacccgcgtgggtcagatcaccgactacgacaagctg
attctcgagatctggaccgacggccgcatcaacccggacgacgccctcaagcaagccggt
tcgattctcaagcatcacctcgatgtgttcgaccgtgtttcggaagagtccttcgaattc
gacaaccaacagtccgaggtcagcgaagagcagaacaagcttcgcaagctcctcaacatg
tcggtcaacgaaatcgagctctccgtccgcgctgcgaactgcttgaacaacgcgaacatc
accacggtcggcgaactcgccatgaagaccgagcaggagatgctcaagtatcgcaatttc
ggtaagaagtcgctcaacgaaatcaaagacaagctcgaggccctcggtctctcgctcggc
atgaaattcgacgaacgcctcctcgactcgaagaaagaaatctaa
DBGET
integrated database retrieval system
