Synoicihabitans lomoniglobus: PXH66_03185
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Entry
PXH66_03185 CDS
T09702
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slom
Synoicihabitans lomoniglobus
Pathway
slom03420
Nucleotide excision repair
slom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PXH66_03185
03430 Mismatch repair
PXH66_03185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_03185
Enzymes [BR:
slom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PXH66_03185
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PXH66_03185
MMR (mismatch excision repair)
Other MMR factors
PXH66_03185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Terminase_6N
DUF4292
Motif
Other DBs
NCBI-ProteinID:
WED65851
UniProt:
A0AAF0I621
LinkDB
All DBs
Position
complement(850443..852467)
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AA seq
674 aa
AA seq
DB search
MDFILDRDDDAPTGPGYPPIDFRAALNDEQFNAVTAPPGPLLVLAGAGSGKTRTLTYRVA
WLLHQGVPPGEIMLLTFTNKASKEMLHRVHDLTGEDARRFWGGTFHSLGNRALRMFGESE
CLKLKPNFTILDAGESESLMKRTVEAEDKLFFKDKTNPKPGPLFNVISLSRNTQKSLAET
VSEHFPQYNDIAVALPTFAKVYAEAKREQNVLDYDDLLELWLKLLTEDPKVADYFGNRFR
HLLVDEYQDTNTIQSQIIDALAPHHRIMAVGDDAQCIYSWRGADFANIMTFPERHPNTAL
HRIETNYRSTPQILNLANGVLEAQPAGRHFDKELRAHRANSMKPYVVQTMDDREQAEFLV
KRIRSLVEDDGVSPNEIAVLYRSHFVALETQLTFSRTGVPYQITSGVKFFERQHVRDLVG
ILRFIYNPTDESAWHRIACLLPKVGEKSAHKIYHAALDHARLMQQDFIDALTTDDVKSKV
PKGAKDEWPSFCASLRQTADAMREEPPQVTVEVAMDGWYGDYLKGAYADYMDRIDELTAL
SGFAARFDAMQDLLAQIVLLNGETSDRAVEPNQEAIKLTTIHQAKGLEYDIVFVIGCADG
LFPGRRAIEANDVEEERRLFYVAVTRAKNELYLCYPKIATKAGPGGMLLTPSRFLQELDP
SLYDALRIKRAHGW
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggatttcattctcgatcgcgacgacgacgcccccactggccccggctacccgcccatc
gactttcgtgcggccctcaacgacgagcagttcaacgccgtcactgcacctcccggcccg
ctgctcgtgctcgccggcgccggctccggcaagacgcgcaccctcacctatcgggtcgcc
tggctgctccatcagggcgtgccccccggcgagatcatgctgctcaccttcaccaacaaa
gcctccaaggagatgctgcaccgcgtgcacgacctcaccggcgaggatgcccgccgcttc
tggggcggcacgttccactctctcggcaaccgcgccctgcgcatgtttggcgagtccgag
tgcctcaaactcaaacccaacttcaccatcctcgacgccggagaatccgagtcgctgatg
aagcgcaccgtcgaggccgaggacaaattgttcttcaaagacaagaccaaccccaagcca
ggcccgctcttcaacgtcatctcgctctcacgcaacacgcagaagtccctcgccgagacc
gtcagcgaacacttcccccaatacaacgacatcgccgtcgcgttgcccacctttgccaag
gtctacgccgaggccaagcgcgagcaaaacgtgctcgattacgacgaccttctcgagctc
tggctcaagctcctcaccgaggacccaaaggtcgccgactatttcggcaaccgcttccgc
cacctgctcgtcgacgagtatcaggacaccaacacgatccagtcgcagatcatcgacgcc
ctcgcgccgcaccatcgcatcatggcggtcggcgacgacgcccagtgcatctactcctgg
cgcggggccgacttcgccaacatcatgacgttcccggagcgtcatcccaacacggccctg
caccgcatcgagaccaactaccgctcgaccccccagattctcaatctcgccaacggcgtg
ctcgaagcccagcccgccggacgtcacttcgacaaggaactgcgcgcccaccgcgccaac
tccatgaagccctatgtcgtccaaaccatggacgaccgcgaacaagccgagttcctcgtc
aaacgcatccgctccctcgtcgaagacgacggcgtatcgcccaacgaaatcgccgtgctc
taccgctcgcacttcgtcgccctcgagacgcaactcaccttctcgcgcaccggcgtgccg
tatcaaatcacttccggcgtcaaatttttcgaacgccaacacgtgcgcgacctcgtcggc
attctgcggttcatctataatccgaccgacgaatctgcctggcaccgcatcgcctgcctc
ctccccaaagtcggcgaaaaaagcgcgcataagatttatcacgccgccctcgatcacgcc
cggctcatgcagcaagacttcatcgacgcgctcaccaccgacgacgtgaaaagcaaggtc
cccaaaggcgccaaagacgaatggcccagcttctgcgcctcgctccgccagacggccgac
gccatgcgcgaagaaccgccgcaagtgaccgtcgaagtggcgatggacggctggtatggc
gactacctcaaaggtgcctacgccgactacatggaccgcatcgacgagctcaccgcgctc
tccggtttcgccgcgcgcttcgacgccatgcaagacctgctcgcgcaaatcgtcctgctc
aacggcgagaccagcgaccgcgccgtcgagcccaatcaagaggccatcaagctcaccacg
attcaccaagccaaggggctcgaatacgacatcgtcttcgtcatcggctgcgccgacggc
ttgttccccggccgccgcgcgatcgaagccaacgacgtcgaagaagaacgccgcctcttc
tacgtcgcggtgacccgagccaagaacgaactctacctctgctaccccaagatcgccacc
aaggccggtcccggcggcatgctgctcaccccctcccgcttcctccaagaattggatccg
tccctctacgacgccctccgcatcaaacgcgcccacggctggtaa
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