Synoicihabitans lomoniglobus: PXH66_04275
Help
Entry
PXH66_04275 CDS
T09702
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
slom
Synoicihabitans lomoniglobus
Pathway
slom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PXH66_04275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_04275
Enzymes [BR:
slom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PXH66_04275
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PXH66_04275
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PXH66_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Lon_lid
DAO_C
Motif
Other DBs
NCBI-ProteinID:
WED66062
UniProt:
A0AAF0CQA3
LinkDB
All DBs
Position
complement(1121556..1122389)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELAEVDFYRKRWHLAAVGQAVTRVRAHAAKKIFREAPATTIRRALTGATLVDSTAAAK
QMVFRFDNGSWLGVHLGMTGQLTAAPPGHRADKHDHLILDTTKHALVFTDPRMFGGVRFH
AGPEAPDWWTKIAPALTSAAFTKTALSDFLRRRARAPIKAVLLMQERFPGIGNWMADEIL
WRAQIHPAQPAGSLLPPEVSQLYREIRTVCRNAMKNIAGAGDYLPHDLNVGIPDTWLFNH
RWRDGGTCPRSGVPLERAEIGGRTSCWSPVRQILRPS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcgccgaagtcgatttttaccgcaaacgctggcacctcgccgccgtcggc
caggcggtgacacgggtgcgcgctcatgcggccaagaagatcttccgcgaagccccggcc
actacgattcgtcgcgctttgaccggagcaactctggtggattcgacggcagccgcgaag
cagatggtttttcgtttcgacaacgggtcctggctgggcgtgcaccttggaatgacgggg
caactcaccgccgccccgcccggccaccgcgccgacaagcacgatcatctgattctcgac
accacgaaacacgccctcgttttcaccgacccgcgcatgttcggcggcgtgcgatttcac
gccggaccggaagccccggattggtggacgaaaatcgccccggcactgacttccgccgcg
ttcaccaaaaccgccttgagcgatttcctgcgtcgacgtgcccgcgcgccgatcaaagct
gtgctgctcatgcaggaacgattccccggcatcggcaattggatggccgacgaaattctc
tggcgcgctcagattcatccggcgcagcccgccgggtctttgttgccccccgaggtgtcc
cagctctatcgcgagattcgcaccgtctgtcgcaacgccatgaaaaacatcgccggagct
ggtgactacctcccccatgacctcaatgtcggcatccccgacacgtggttgttcaaccac
cgttggcgcgacggcggcacctgtccgcgcagtggcgtgcctctcgaacgcgccgaaatc
ggtggccgcaccagctgctggtctccggttcgccagatcctgcgtccgtcatga
DBGET
integrated database retrieval system
