Synoicihabitans lomoniglobus: PXH66_05440
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Entry
PXH66_05440 CDS
T09702
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
slom
Synoicihabitans lomoniglobus
Pathway
slom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PXH66_05440 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_05440 (uvrA)
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PXH66_05440 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PXH66_05440 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_33
AAA_22
DnaJ_CXXCXGXG
AAA_21
nSTAND3
AAA_25
UvrA_DNA-bind
NACHT
Viral_helicase1
DUF4350
AAA_18
SLFN-g3_helicase
AAA_15
BCA_ABC_TP_C
ELYS-bb
Motif
Other DBs
NCBI-ProteinID:
WED66290
UniProt:
A0AAF0CQN3
LinkDB
All DBs
Position
complement(1414059..1419713)
Genome browser
AA seq
1884 aa
AA seq
DB search
MVSSGRPSAPDCIRLRGVRQNNLKGFDLDIPLGRYVVVTGLSGAGKSSLVFDTLHAEGQR
RYVETFSAYTRQFLDLLDKPAVDTIENIRPSIAIEQTNTVKTSRSTVGTMTELTDYAKVW
FSHVAKCYDPDTGLEVVDDTPATIWNKATVAHPDTQVVVAFKVTRPGKLKWSEILKNLRG
QAYVRVLVPDVPTPDLTAHRIDELEAKLSLLDDVDHLFVAQDRVTLRDADRGRFLEAAES
ALHFGQGELHLFKSASSGPSFVAAGHYSRGLHAPGSGRSFRAASPALFSFNSPLGACPHC
RGFGRVIEIDYRLAIPDHTKSIDDGAIKCWEGQVYGESKKDLLKFTRKLKIPTNIPFAQM
KPEHRNFVINGSPGYGEDGVEWPKAWYGLKGFFGWLEKNTYKMHVRVFLSRFRAYNPCPH
CGGTRLQPEALCWKWEGQTLPELYTTPVSDLLQRLHANTPAAGDRQSELAFNAMVTRLRY
LEQVGLGYLTLDRSSKTLSGGEVQRVNLTSCLGTSLVDTLFVLDEPSVGLHPRDIDRLIG
IIRTLTDAGNTVVVVEHDEAMIRAADHLIEIGPEPGSRGGHVVFEGNLPAMLESEASITG
RYLSGRATISAPASRRTVSAQTPRLTFEGVTKHNLRDVTLAVPLQRLVCLSGVSGSGKST
LLNHAIYQGLLTHRFQQTEDVAAINAIHGDDGSEIVLVDQSPLSRTPRSNPALYCEAWDG
IRNLFAREPAATAAGFTASSFSFNAGDGRCDHCQGLGYERVEMQFLSDVFVPCPMCEGRR
FKPEVLAIKWNGRSVAELLQTSISDALPLFAEQDAIASRLRSLDTVGLGYLTLGQPLNTL
SGGEAQRLKLVKYLGAMGESTADESALLLLDEPTTGLHRHDVGRLLAVLQALVDRGHSVI
VIEHNLDVLKAADWLIEIGPEAGADGGRIIAEAPPETIAALTGRAATATSPYLREALDPT
CHLIGDKMPLLAAESAVAMPVRASGLSIVGARENNLKNLSLNLPHNELIVVTGVSGSGKS
TLAFDIVFAEGQRRFMESMSAYARQFVEQLPRPAIDHLGGIPPTVAIEQRITRGSRKSTV
ATITEVAQYLRLLYARMGVQHHPDSDRPVEPLSPAQLRQLLTRVLRSPQARRAKHLYLCA
PLIRGRKGHHEPIAKWIERHGFELMRADGRVFPVDAFTKLDRYKEHDVEVVVADLKTLAA
TELGTALQEALRLGKGGCFLINPAGEVLSWFSTTRTDLESGESFPELDPKHFSHNSPRGW
CPACRGHGRIFGWMAAKNDKDDLPPEIADLSAGLSEKSDASSTPCPQCLGDRLNRVSRAV
KLPLKGRQPPISLPDLLRGTAEAVLKNLRNLKSDTRSKIILRDILPQIEERLKFLDHVGL
GYLALERPTATLSGGEAQRIRLAAQLGTNLAGVLYVLDEPSIGLHARDNDRLIATLESLR
DKGNSLLVVEHDDELMLHADRIVDLGPGAGTHGGELLAAGTPAEIQANAQSLTGLFLAKG
IAHPIKGAYRSLPAPRGPGRATDWLKLSKVSFRNLQGFDLNLPLGRLVMAVGPSGAGKST
LFRDVLRPAVSAAIKAKKTRLTGATLVKMGAFDDVEEAMEGAPFGELSGALPFKTVIEVD
QSPIGKTPRSTPATYLGIFDLIRQFFASLPESKIRGYTASRFSFNTAGGRCETCAGGGRI
KLEMAFMPDTFLPCDDCGGSRYGPELDDVTWNDRTIGDVLRLTFEEAAAFFSFHSQLGAI
CQLMVDCGLGYLTLGQSSPSLSGGEAQRLKLIAELSRGLASYTERSRGQQPHNLYLLEEP
TIGLHLSDCEKLIHLLHSLVDQGHSVVVIEHHLDLIAEADYVIELGPTGGPDGGRLLYQG
NLAGLMKRARSVTAPYLREKIDRA
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
gtggtttcctctggtcgtccttccgctcccgattgtatccgcctccgtggtgttcgtcag
aacaacctgaaggggtttgacctcgatatcccgctggggcgctacgtcgttgtcaccggt
ctcagcggcgcgggaaaaagctcgctcgtcttcgataccctgcacgccgagggccaacgc
cgctacgtcgagacgttcagtgcctacacgcgacaatttctcgatctgctcgacaaaccc
gccgtcgacacgatcgagaatatccgcccgtccatcgcgatcgagcagaccaacacggtc
aaaacatcgcgttccaccgtcggaaccatgaccgagctcaccgactacgccaaggtgtgg
ttcagtcacgtggcgaaatgctacgaccccgacaccggactcgaggtcgtcgacgacacg
cctgccaccatctggaacaaagcgaccgtcgcccatcccgatacgcaagttgtggtggcc
ttcaaagtgacacggccgggaaagctcaagtggagcgagattctcaaaaacctgcggggc
caagcctatgtgcgcgtgctggtgcccgatgtgccgactcccgacctcaccgcgcatcgg
atcgatgaactggaggccaaactctcacttctcgacgacgtcgatcacctcttcgtagcg
caggaccgcgtcacgctgcgcgatgccgatcgcggtcgcttccttgaagctgccgagtcg
gccctgcatttcggccaaggcgagcttcacctcttcaaatccgcctcctccggcccgagc
ttcgtcgccgccggacactactcccgcgggcttcacgcgcccggctccggtcgctcgttt
cgcgcggcgagtcccgcgttgttttcgttcaactcgccgctcggagcgtgtccgcattgt
cggggcttcggtcgcgtcatcgaaatcgattaccgcctggccatccccgaccacaccaag
tcgatcgatgatggcgccatcaaatgctgggaaggccaagtctacggcgagtccaagaag
gacctgctcaaattcacccggaaactgaaaatcccgaccaacatccccttcgctcaaatg
aagccggagcatcggaacttcgtgatcaacggttcccccggttacggcgaagacggcgtc
gagtggccgaaggcttggtatggcctgaaaggctttttcggctggctcgaaaagaacacc
tacaagatgcacgtgcgggtcttcctttcccgttttcgcgcctacaatccgtgtccgcac
tgcggcggcacgcgcctgcaacccgaggccctctgttggaaatgggaagggcaaacgctg
cccgaactctacaccacgccggtcagcgacttgctccagcgcctccacgccaacacgccc
gccgccggagaccgccagtccgaactcgcgttcaacgccatggtcacgcgcctgcgctat
ctggaacaggtgggactgggttacctgaccctggatcgctcgtccaaaacgctatcaggc
ggcgaggtccaacgcgtcaacctcacctcctgcctcggcacttcgttggtcgataccttg
ttcgtcctcgacgagccgagtgtcggtctgcatccgcgtgatatcgaccggctcatcggc
atcatccgcacgctcaccgatgcgggtaacaccgtcgtcgtcgtcgagcacgacgaagcc
atgattcgcgcggccgaccatctcattgaaatcggcccggaacccggcagtcgcggaggt
cacgtggtcttcgaaggcaaccttcccgccatgctggaatctgaagccagtatcaccggc
cgctacctctccggtcgcgccaccatctcggcccccgcgtcgcgccggacggtaagcgcc
cagactccgcgactcacgttcgaaggcgttaccaaacacaacttgcgcgacgtcaccctc
gccgtgccattgcaacgattggtctgtctcagcggcgtgtccggctcgggcaaatccacc
ctgctgaaccacgcgatctaccagggcctgctgacacatcgttttcaacaaaccgaagac
gtcgccgcgatcaacgcgatccacggcgacgacggcagcgagattgtgctcgtggaccag
agtccgctttcccgcaccccgcgttccaatcccgccctctactgcgaagcctgggacggc
atccgcaatctgttcgctcgcgaaccggccgccactgccgccgggttcacggcctccagc
ttttccttcaacgccggcgacgggcgatgcgatcactgtcagggcctcggttacgaacgc
gtcgagatgcagttcctctccgatgtcttcgtcccctgcccgatgtgcgagggccgccgt
ttcaaacccgaagtgctcgcgatcaaatggaacggccgctccgtggccgagctcctgcag
acttcgatctccgacgccctgccactctttgccgagcaggacgccatcgcttcgcgtctc
cgctccttggataccgtgggactcggttacctaacactcggccagcccctcaacaccctc
tccggcggtgaagcccaacgccttaaactggtcaaatatctcggcgccatgggtgaatcc
accgccgatgaatccgccctgcttttactggacgagcccaccaccggtctgcatcgccac
gacgtcggtcgcttgctcgcggtgttgcaggcactcgtcgatcgcggccacagcgtgatc
gtgattgagcacaatctcgacgtgctgaaagccgccgattggctcatcgaaatcgggccc
gaagccggcgccgacggcggtcgcatcatcgccgaagccccgcccgaaaccatcgccgcc
ctcaccggtcgcgccgccaccgccacgtccccgtatctccgcgaagccctcgatcccact
tgtcacctaataggtgacaaaatgccgttacttgctgctgaatcagctgttgcgatgccc
gttcgagcctccggactgtcgatcgtgggggcgcgggagaacaacctgaagaacctgtcc
ctgaatctgccccacaacgaattgatcgtggtcacgggggtgtcgggttcgggtaaatcc
acgttggccttcgacatcgtgttcgccgagggccaacggcgcttcatggaatccatgtcg
gcctacgcccggcaatttgtggagcagttgccgcgacccgccatcgatcacttgggcggc
atcccacccaccgtggccatcgagcaacgcatcacgcgcggctcccgcaaatcaaccgtg
gcgaccattactgaagtagcccaatatttgcgcctgctctacgcccgcatgggggtgcag
catcatccggactccgaccgaccggtcgaaccgctgagcccggcccagctccgccaattg
ctaactcgcgtgctgcgcagcccccaggcccgccgcgccaaacatctgtatttgtgcgcg
ccgctgattcgtggccgcaagggacaccacgagccgatcgcgaagtggatcgagcgtcat
gggtttgaactcatgcgtgcggacggacgcgtatttcccgtcgacgcgttcaccaaactc
gaccgctacaaggaacacgatgtcgaggtggtggtggccgatctcaagaccctcgccgcc
accgaactcggcactgccttgcaggaggcgctccgcctcggcaaaggcggctgtttcctc
atcaaccccgccggcgaagtgctgtcctggttttccaccacgcgcaccgacttggagtcc
ggcgaatcgtttccggagctcgatcccaaacatttctcgcacaattccccgcgcggctgg
tgcccggcctgccgcggacacggacgcatcttcggctggatggcggcgaaaaacgacaag
gacgacctgcccccggagatcgcggacctgtcggccggcttaagcgaaaaatccgacgca
tcatcaacgccctgccctcagtgcctgggcgaccgtttgaaccgcgtttcccgggccgtg
aaactgcccctgaagggacgccagccgcccatctccttgcccgatctgctgcggggcacc
gccgaagcggttttgaagaacctgcgtaacctaaaatcggatactcgcagcaaaattatt
ctccgggacatcctgccgcagattgaggaacgcctgaaatttctcgatcacgtgggactc
ggttacctcgcgctggagcggcccaccgccacgctctcgggcggtgaagctcagcgtatt
cgtctggccgcccaactcggcaccaatcttgccggcgtgctctacgtgctcgacgaaccc
agcatcggcttgcacgcccgcgacaacgaccgcctgatcgccacgctcgaatccctccgc
gacaagggcaactccctgctggtcgtcgagcacgacgacgaactcatgctccacgccgat
cgcatcgtcgacttgggtcccggtgccggcacccatggcggcgagttgctggcggccggc
acgcccgccgagatccaagccaacgcccaatccctcaccggcctgttcctcgccaagggt
atcgcgcatcccatcaagggagcctaccggagcctgcccgccccccgcggcccgggtcga
gccaccgattggttaaagctcagcaaggtcagcttccgcaacctgcagggattcgacctc
aatctgccgctcggacgtctcgtcatggcggtgggccccagcggggccggtaaatcgacg
ctgtttcgggacgtgctgagaccggcggtgagcgctgccatcaaggccaaaaagacccgc
ctcaccggcgccaccttggtcaaaatgggcgcgtttgacgacgtggaagaagccatggag
ggtgccccgttcggtgagctcagcggagcgctgccattcaagaccgtgatcgaagtcgat
caatcgcccatcgggaaaacaccgcgctccacgccggccacttatctcggcatttttgat
ttgatccgacaatttttcgcgtccctgccggagtccaagattcgtggatacaccgccagt
cggttttccttcaacaccgccggcgggcgctgcgagacctgtgcgggcggcggacgcatc
aaactcgaaatggcgttcatgccggacacgttcctcccctgcgacgactgcggtggatcg
cgctacggcccggagctcgatgacgtaacgtggaacgatcgcaccatcggcgatgtgctg
cgactgaccttcgaagaagcggcggcatttttctcctttcacagccaacttggcgccatc
tgccagctaatggtcgactgcggcctgggctacctgactcttggccagagctcgccatcg
ctctccggcggcgaagcgcagcgcctcaagttgatcgctgaattgtcgcgcggactggcc
tcctacaccgaacgcagccgcggccagcaaccgcacaacctttacctgctggaggaacct
acgatcggcctgcatttgagcgactgtgaaaagctcatccacctgctgcactcgttggtc
gatcaggggcattcggtcgtcgtgatcgagcatcacctcgatctgatcgccgaagccgac
tacgtgatcgaactcggcccgaccggaggtcccgacggcggacggctgctctatcagggc
aacctcgccggattgatgaagcgggcgcgttcggtcacggcgccgtatttgcgcgagaaa
attgaccgtgcttaa
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