Synoicihabitans lomoniglobus: PXH66_14810
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Entry
PXH66_14810 CDS
T09702
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slom
Synoicihabitans lomoniglobus
Pathway
slom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXH66_14810 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slom03019
]
PXH66_14810 (recQ)
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_14810 (recQ)
Enzymes [BR:
slom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PXH66_14810 (recQ)
Messenger RNA biogenesis [BR:
slom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PXH66_14810 (recQ)
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PXH66_14810 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WED63605
UniProt:
A0AAF0CMV7
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All DBs
Position
3843084..3844922
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AA seq
612 aa
AA seq
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MPELLDTLRTTFGYDHFRPLQREIIEAHLASRDVFALLPTGGGKSMCFQLPALVRADRGL
TVVVSPLIALMKDQVDQLQAAGVAATYLNSSLSSAEARSRMAGLHRGEFRLLYVAPERLM
LDNWQQNLTGWNVAAIAIDEAHCVSEWGHDFRPEYRQLSELRDILPEVPFMALTATATER
VREDIVSHLQLKEPAVFVASFNRPNLTYKVLPKNGPARQIMDFVKSRPDDSGIVYCASRA
AAERCAEALAARGFAAKPYHAGLPAHERAENQEAFLRDDVRIICATIAFGMGINKPNVRW
VIHYDLPKNIEGYYQETGRAGRDGLPGDCLLLFSAGDAAKQTHFIDEITDEHERSVARSQ
LRQIMHYAESAGCRRSELLGYFGESFTIDGCSGCDNCLEPRETYDGTIVAQKFLSCVYRV
RRASQFGCGANHVIEVLTGADTDKIRRWGHDRVTTYGIGTELSRPQWAAVFRELLRLGFL
MQTEGQYPTVELTQEGVDILRARTPITLTKPMITPKAARVRRKREGEIACDEILFDRLRQ
QRKRLADERGVPAYVIFGDATLRQMAREYPENPDAMHDIFGMGAKKHAEFAETFAGIIAD
YLRENSRMTFND
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaacttctcgacacgctccgcaccacctttggctacgatcattttcgcccgctc
cagcgcgagatcatcgaagcgcatctcgcgtcacgtgatgtcttcgccctcctgcccacg
gggggcggcaagtcgatgtgtttccaactgccggctttggtgcgcgccgatcggggactg
accgtggtcgtgtcgccgctcattgctttgatgaaggaccaggtggatcagttgcaggcc
gccggcgtcgccgcgacttatctcaactcgtcgctgtcttccgccgaagctcgttcgcgc
atggcgggcttgcaccgcggcgagtttcgcctgctctacgtcgcgccggagcgactcatg
ttggacaattggcagcagaacctcaccggctggaatgtcgcggccatcgccatcgacgag
gcacactgcgtttcggaatggggccatgattttcggccggaataccggcagttgtccgag
ctgcgggacatcctgcccgaagtgccgttcatggccctcaccgccaccgccaccgagcgc
gtgcgtgaagacatcgtctcgcatctgcagttgaaagagccagccgtgtttgtggcgtcg
ttcaaccggcccaatctcacctacaaggtgctgccgaagaacggacccgcgcgacagatc
atggacttcgtcaagtcgcggcccgacgacagcggcatcgtctactgcgcctcccgtgcc
gccgccgaacggtgtgccgaagcactggctgcccgcggtttcgccgcgaagccctaccac
gccggtctgccggcccacgaacgcgccgagaaccaggaggccttcctgcgcgacgatgtg
cgcatcatctgcgccaccatcgcgtttggcatgggcatcaacaaacccaatgtccgctgg
gtgattcactacgacctgcccaagaacatcgaaggctactatcaggaaaccggtcgggcc
ggccgcgatggtttgcccggggattgcctgttgctgttcagcgccggcgacgccgccaaa
caaacgcatttcatcgacgaaatcaccgacgaacacgaacgcagcgtcgcccgttcccag
ttgcggcagatcatgcactacgccgaatccgccggttgtcgccggtcggaactcctcggc
tatttcggcgagtcgttcacgatcgacggttgcagcggctgcgacaactgcctcgaaccg
cgtgagacctacgacggcaccatcgtcgcccagaaatttctatcgtgcgtctaccgcgtg
cgtcgcgcctcccaattcggctgcggcgccaaccacgtcatcgaagtgctcaccggcgcc
gacaccgacaaaatccgccgctggggccacgatcgcgtgaccacctacggcatcggcacc
gaactttcccgcccccagtgggcggccgtcttccgtgaactgttgcggctcggctttctc
atgcaaaccgagggccagtatcccacggtcgagctcacgcaggagggcgtcgacattctg
cgtgcccgcacgccgatcaccttgaccaagcccatgatcacgcccaaggccgcccgggtg
cgccgcaagcgcgagggcgagattgcgtgcgacgagattctcttcgaccggctgcgccag
caacgcaaacgcctcgccgacgaacgcggcgtgccggcttacgtcatcttcggcgatgcc
actctgcgccagatggctcgcgagtatccggaaaaccccgacgccatgcacgatatcttc
ggcatgggggcgaaaaaacacgccgagttcgccgaaacctttgccgggatcatcgctgat
tatctccgcgaaaattcgcgcatgactttcaacgactga
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