Synoicihabitans lomoniglobus: PXH66_18035
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Entry
PXH66_18035 CDS
T09702
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slom
Synoicihabitans lomoniglobus
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PXH66_18035
Enzymes [BR:
slom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PXH66_18035
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
WED64241
UniProt:
A0AAE9ZVN5
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Position
complement(4705555..4707567)
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AA seq
670 aa
AA seq
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MKLPRFLLPLFAALLVSASAAMAATAVTLSETADEYILANGIVTARVAKASGDLVSLRYG
EREMLATFLNENGTPDLAKDPPGHNPEGVNRGFTDHQYGFWSHDAMGPRGSGDAIARITI
DPKTNGGERAEVSVKGISRDRFMGTGPGVRGGWDAKGQFAADIEIRFALGRGESGVYTYC
AFEHPADYPTTALGEARFCAKLADFFDWMSVADGAHHNKYYPKGLREGDKYVYTVPQTDN
PTFGWSSTTENVGFWCLNASMEYMSGGPTKVEFQGHRDTNRISAPCVLNYWRSSHYGGSA
VDVAAGEQWSKVIGPFMLYVNSGDDPQVMFDDAKAQQKVQASAWPYAWVNGVDYPSPTER
ATVRGELVLTDPLAPGGAKMSNVRVGLTAAPWTSPIVGRSGQPTVVGWQRDAKNYQFWTE
ATDAGRFEISHVRPGTYTLRAFADGVLGEFAQADVTIGSGPVDLGKITWMPVRHGRQLWE
IGIPNRNGSELFRGESFWEPQIPLDYAKLFPDDVNFVVGQSDFRQDWFFQQVPHNENPDV
EPRPFYGIRDEGRATPFAVTFDVDATLSGRAVLRLALCGTATRELEITVNDQSVGTITLP
MSDGAIARHGRQGLWYETELAFDAAMLQRGTNVVKIIVPAGPINNGILYDYVRLEWDEKT
PTATLAAAAH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaccccgattcctcctccccctgttcgcagcgctgttggtgtccgcgagcgcc
gcgatggcggccacggccgtcacgctcagcgaaaccgccgacgaatacattctcgccaac
ggcatcgtgaccgcacgcgtggccaaggcgtccggcgatctcgtttcgctgcgctacggc
gaacgcgaaatgctcgcaacgttcctcaatgagaacggcacgcccgacctcgccaaagac
ccgcccggccacaatcccgaaggcgtcaatcgcgggttcaccgatcaccaatacggcttc
tggtcccacgacgcgatggggccgcgcggatcgggtgacgcgatcgcccgcatcacgatt
gatccgaaaaccaatggcggtgagcgcgcggaagtttcggtcaaaggcatctcgcgggat
cgcttcatgggcacgggtcccggcgtgcgcggcggttgggacgcgaaggggcaatttgca
gcggatatcgagatccgtttcgcgctcggtcgcggcgagtccggggtctacacgtattgc
gctttcgagcatccggccgactacccgaccaccgcgctgggcgaggcgcggttttgcgcg
aagctggcggacttctttgattggatgagcgtcgccgacggcgcgcatcacaacaaatat
tacccgaagggactgcgcgaaggggacaaatacgtctacaccgtgccgcagaccgacaac
ccgacgtttggctggtcgagcacgaccgaaaacgtcggattttggtgcctcaacgcctcg
atggaatacatgagcggcgggccgaccaaagtggagtttcagggccatcgtgacaccaac
cgcatctccgccccgtgtgtattgaactactggcgcagcagccactacggcggctccgcc
gtcgatgtagccgcgggcgaacagtggtccaaagtcatcggaccgttcatgctgtatgtg
aattccggtgacgacccgcaggtgatgttcgacgacgccaaggctcagcaaaaagtccaa
gcgagcgcgtggccttatgcctgggtgaacggcgtggattatccgtcgcccaccgaacgg
gcgactgtccggggcgaactcgtgctcacggatccgctcgcgcccggcggggcgaagatg
agcaatgtgcgtgtcggtctcaccgccgcgccatggacctcgccgatcgtcggtcgcagt
ggccaacccaccgtggtgggctggcagcgtgacgcgaaaaactaccagttctggacggaa
gcgaccgacgcgggccggtttgaaatttcccacgttcggcccggcacctacacgctgcgc
gccttcgccgatggcgtgctgggcgagttcgctcaagccgatgtcacgatcggctcgggg
ccggtggatctcggcaaaatcacgtggatgccggtgcgccacggtcgtcagctttgggag
atcggcatccccaaccgtaacggctccgagttgttccggggcgagtcgttttgggaaccg
cagatcccgctcgactacgcgaaactgtttcccgacgacgtgaacttcgtcgtgggccag
agcgactttcgccaggattggtttttccagcaagtgccgcacaacgagaatcccgacgtg
gagccgcgtccgttctacggtattcgtgacgaaggtcgcgccacgcctttcgcggtgacc
ttcgatgtggatgccacgctgtccggccgggcggtgttgcgtctcgcgctctgcggcacc
gccacgcgcgaactcgaaatcacggtcaatgaccagtcggttggcacgattacgttgccc
atgagcgacggcgcgatcgcccgtcacggtcggcagggactctggtatgaaacggagttg
gctttcgacgccgcgatgctgcagcgcgggaccaatgtggtgaaaatcatcgtgccggcc
ggaccgatcaacaacggcattctctacgattacgttcgcctcgaatgggacgagaaaacc
cccaccgccacgttggccgccgccgcgcactga
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