Synoicihabitans lomoniglobus: PXH66_22505
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Entry
PXH66_22505 CDS
T09702
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slom
Synoicihabitans lomoniglobus
Pathway
slom03030
DNA replication
slom03430
Mismatch repair
slom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PXH66_22505
03430 Mismatch repair
PXH66_22505
03440 Homologous recombination
PXH66_22505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slom03032
]
PXH66_22505
03400 DNA repair and recombination proteins [BR:
slom03400
]
PXH66_22505
Enzymes [BR:
slom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PXH66_22505
DNA replication proteins [BR:
slom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PXH66_22505
DNA repair and recombination proteins [BR:
slom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PXH66_22505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
WED65119
UniProt:
A0AAF0CPJ8
LinkDB
All DBs
Position
5768614..5769345
Genome browser
AA seq
243 aa
AA seq
DB search
MTDSTSLPVEIQRYLAATADPLPDDTPIERLRFVALDCETTGTDATKDAIISMGAIAVID
GEIRLEEEFEALLKIRHNTSSVVVHGITAEEAARKGVYVEEALTRFLDYLGNAVIVGHHI
GFDVEVIQRACLRNFGIELNNRWIDTMELTLHLDDVGAIEAMRRSVGGTASPFQDFSLDG
LCRRFRIAPHDRHTAAGDAFITAQIFLKLLRLAQRHDRTTLGALAERWVDPRDTEEAGGG
SQK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccacgtcattgccggtcgagattcagcgttatctggccgccacggcggac
ccgcttcccgatgacacgccgatcgagcggctccgttttgtcgcgctggattgcgaaacc
accggcacggacgcgaccaaggacgcgatcatttccatgggcgcgatcgcggtgatcgac
ggtgaaatccggttggaagaggagttcgaggcgctgttgaaaatccggcacaacacgtcc
tcagtcgtcgtccacggcatcaccgccgaagaagcggcgcggaagggggtttacgtggag
gaggcgctgacgcggttcttggactatctgggcaatgccgtgattgtgggccatcacatt
gggttcgatgtggaagtgatccagcgcgcctgcctgcggaattttggcatcgaattgaac
aatcgttggatcgatacgatggagctcaccctgcacctcgatgacgtgggggcgattgag
gccatgcgtcgatcggtcggcggcacagcgtctccattccaggatttttcgttggatgga
ttatgccgacgcttccggatcgcgccgcacgatcgccatacggcggcgggggatgcgttc
atcaccgcgcagatttttctcaaattgttgcggctcgcgcagcgccacgatcgcacgacc
ctgggcgcactcgcggaacgatgggtcgacccgcgggatacggaggaggctgggggaggc
agccagaagtag
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integrated database retrieval system
