Streptomyces longhuiensis: LGI35_11000
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Entry
LGI35_11000 CDS
T09038
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slon03000
]
LGI35_11000
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
slon01504
]
LGI35_11000
Transcription factors [BR:
slon03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LGI35_11000
Antimicrobial resistance genes [BR:
slon01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
LGI35_11000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_24
TetR_C_24
HTH_IclR
HTH_AsnC-type
DUF6471
TetR_C_11
LacI
Xre-like-HTH
HTH_20
COR
PilB3_C
DUF6262
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
UDL98751
LinkDB
All DBs
Position
complement(2326796..2327347)
Genome browser
AA seq
183 aa
AA seq
DB search
MSVDRDQVLRTAAALLTRKATATMDEVARAAGLSRATLHRHFAGRDALVRALEELGIQEC
EAALDAARLDEGSAADAVRRLVAEIQPCAGLLAFLVTENQLFEGESQNEGWARLDARIAG
LFTRGQERGEFRIDLTPAWLTEALYSLIGGGAWAVQDGRVAAKDFQHMIVELLLGGARRR
VEP
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgaccgagaccaggtgctgcgcaccgcagccgccctgctcacccgcaaggcc
acggccacgatggacgaggtggccagggcggccggtctcagccgcgccacgctgcaccgg
cacttcgcgggccgggacgcactcgtcagggccctcgaggagttggggatccaggagtgc
gaggcggccctcgacgccgcccggctcgacgagggcagcgccgccgacgccgtgcgccgg
ctcgtggcggagatccagccgtgcgccggactcctcgccttcctcgtcacggagaaccag
ctcttcgagggcgagtctcagaacgagggctgggcccggctcgacgcccgtatcgccggg
ctgttcacgcgcggccaggagcgcggcgagttccgtatcgacctgacacccgcgtggctc
acggaggcgctctacagcctgatcggcgggggcgcctgggccgtacaggacggccgtgtg
gccgccaaggacttccaacacatgatcgtcgagcttctgctcggcggcgccagacggaga
gtggaaccatga
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