Streptomyces longhuiensis: LGI35_11380
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Entry
LGI35_11380 CDS
T09038
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
slon03051
]
LGI35_11380 (pafA)
Enzymes [BR:
slon01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LGI35_11380 (pafA)
Proteasome [BR:
slon03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LGI35_11380 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UDL98824
LinkDB
All DBs
Position
complement(2412926..2414287)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFCERRGIRTGTV
EQVLELWGRVLDSIEAEDLDRIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacatgtacgtttagggga
cagcgccgcctgtctcctgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcggaacggcgcccgcctctatctcgatgtcgggtca
catccggaatatgcaactcccgaatgtgacaacgtgaccgagttggtcacgcacgacaaa
gcgggcgagcgcattctggaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacacggactcggcgggaaactcctac
ggctgccacgagaactatctggtggcccgtcacggggagttctcgcgactcgcggacatc
ctcattccgttcctggtcacacggcaactgctgtgtggcgcgggcaaggtgctgcagact
ccgcgcggcgccgtgtactgcgtgagccagcgcgccgagcacatctgggagggcgtgtcc
tccgcgaccacgcgttcccgccccatcatcaacacccgcgacgaaccgcacgcggacgcc
gagcgctaccggcgtctgcacgtcatcgtcggcgactcgaacatgtccgagacgacgatg
ctcctcaaggtgggcgccaccgacctcgtgctccgcatgatcgaggccggcacggtcatg
cgtgacctcacactggagaacccgatccgggccatccgcgaggtcagccacgacatcacc
ggccggcgcaaggtgcgtctggccagcggccgcgaggcatccgccctcgaggtgcagcgc
gagtactacgagaaggccgtggacttctgcgagcgccgcgggatccgcaccggcaccgtc
gagcaggtcctcgaactgtggggccgcgttctcgactcgatcgaggccgaggacctcgac
cggatcggcaccgagatcgactgggtgatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgaccatgtcgcatccgcgggtcgcgcagatagacctcgcgtatcacgac
atccaccgccgcaggggcctctactaccttctggagaggaagggacaggcggcccgcatc
tgcaacgacctcaagatcttcgagggcaagtcggtgccgccgcagaccacgcgcgctcgg
ctgcggggcgacttcatccgcagggcccaggaacagcgccgtgacttcacggtcgactgg
gtgcacctgaagctgaacgaccaggcgcagcggacggtgctgtgcaaggaccccttccgg
tcggtggacgaccgggtggagaagctgatcgctggaatgtag
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