Streptomyces longhuiensis: LGI35_11890
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Entry
LGI35_11890 CDS
T09038
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon00061
Fatty acid biosynthesis
slon00071
Fatty acid degradation
slon01100
Metabolic pathways
slon01212
Fatty acid metabolism
slon02024
Quorum sensing
slon04146
Peroxisome
Module
slon_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LGI35_11890
00071 Fatty acid degradation
LGI35_11890
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LGI35_11890
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGI35_11890
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slon01004
]
LGI35_11890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slon04147
]
LGI35_11890
Enzymes [BR:
slon01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LGI35_11890
Lipid biosynthesis proteins [BR:
slon01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LGI35_11890
Exosome [BR:
slon04147
]
Exosomal proteins
Exosomal proteins of breast milk
LGI35_11890
Exosomal proteins of breast cancer cells
LGI35_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UDL98919
LinkDB
All DBs
Position
complement(2524691..2526358)
Genome browser
AA seq
555 aa
AA seq
DB search
MSSSIYAAKPWLGQLSGAQRAPVTPADSVLHAFRAAVRKAPDRTAVAYFDGRLSYRELDE
LSDSVAAHLAARGLERGDRAALMLQNSPHFVIGLLAAYKAGATVVPVNPMYKSGEVTHVL
HDADVTALICSDRAWEAYLRETAADSPVRIVLTACELDLQTRNDERVLKFERVEPQAEDA
DDLLTVARAGHAAPEGRDPGPDDIALISYTSGTSGTPKGATNLHRNITYNAERQRTGLGI
PEGGTYFGLAPLFHITGMVCELVSSFANTGTLVLAYRFEAGVVLDAFAEHRPAYTVGPST
AFMALAAHPAATREHFASFQSISSGGAPVPPALVEKFRAGFGPYIHNGYGLTECTAPCAS
VPPGREAPVDPVSGTLAVGVPGPESIVRIVDDLGQEVPFGEQGEIAVRGPQVVPGYWKRP
DATAESFPDGELRTGDIGFMDADGWLYVVDRKKDMINASGFKVWPREVEDVLYTHEAVRE
AAVVGVPDPYRGETVRAYVSLRPGVSVGPDDLSAYCKERLAAYKYPREVEILPELPKTTS
GKILRRELRSRTQNS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgatctacgcggccaagccctggctcgggcagctctccggggcgcagcgg
gctccggtcaccccggccgactccgtgctgcacgccttccgcgccgcggtccgcaaggcc
cccgaccgcaccgccgtcgcctacttcgacggccgcctcagctaccgcgagctcgacgag
ctcagcgattccgtcgccgcgcacctcgccgcgcgcggcctcgagcgcggcgaccgcgcc
gccctcatgctgcagaactccccgcacttcgtgatcggcctgctcgccgcctacaaggcg
ggcgccaccgtcgtgccggtcaacccgatgtacaagtcgggcgaggtcacccacgtcctg
cacgacgccgacgtgaccgccctgatctgctcggaccgcgcctgggaggcgtatctgcgc
gagaccgccgcggactctcccgtacggatcgtgctcaccgcctgcgagctggacctccag
acgcggaacgacgagcgggtcctcaagttcgagcgtgtcgagccgcaggccgaggacgcc
gacgacctcctgacggtcgcccgcgcgggccacgcggcgcccgagggccgcgacccgggc
ccggacgacatcgcgctcatcagctacacctccggcaccagcggcacgcccaagggcgcc
acgaacctgcaccgcaacatcacgtacaacgccgagcgccagcgcaccggactcggcatc
cccgaagggggcacgtacttcgggctcgcgccgctcttccacatcacgggcatggtctgc
gagctggtctcctccttcgcgaacacgggcaccctcgtcctcgcgtaccgcttcgaggcc
ggtgtcgtcctggacgcgttcgccgagcaccggcccgcctacaccgtgggcccctcgacc
gcgttcatggcgctcgccgcgcacccggccgcgacccgcgagcacttcgcctcgttccag
tcgatctcgtccggcggcgcgccggtgccgcccgccctcgtggagaagttccgggccggc
ttcggcccttacatccacaacggctacggcctcaccgagtgcacggccccctgtgcctcc
gtgccgcccggcagggaagcccccgtcgaccccgtctccggcaccctcgccgtaggcgtc
ccgggacccgagagcatcgtccggatcgtggacgacctcggccaggaggtgcccttcggc
gagcagggcgagatagccgtccgcggcccccaagtagtgcccggctactggaagcgcccc
gacgccaccgccgagtccttcccggacggcgaactgcggaccggagacatcggcttcatg
gacgccgacggctggctctacgtcgtcgaccgcaagaaggacatgatcaacgcctccggc
ttcaaggtctggccccgtgaggtggaggacgtcctctacacgcacgaggccgtgcgcgag
gccgccgtcgtgggtgtccccgacccctaccgcggggagacggtcagggcgtacgtgagt
ctgcgcccgggcgtctcggtgggcccggacgacctgtccgcctactgcaaggagcggctc
gccgcgtacaagtacccgcgcgaggtggagatcctgccggagctgccgaagacgacaagt
gggaagatcctccggcgggaactgcgttcccgtacacagaacagctga
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