Streptomyces longhuiensis: LGI35_12760
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Entry
LGI35_12760 CDS
T09038
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03030
DNA replication
slon03430
Mismatch repair
slon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGI35_12760
03430 Mismatch repair
LGI35_12760
03440 Homologous recombination
LGI35_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slon03032
]
LGI35_12760
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_12760
Enzymes [BR:
slon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGI35_12760
DNA replication proteins [BR:
slon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGI35_12760
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGI35_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UDL99073
LinkDB
All DBs
Position
2724836..2725831
Genome browser
AA seq
331 aa
AA seq
DB search
MLEDQTTAASAAPWPAAYPQGYAVVDVETTGLSRDDRIISAAVYRLDARGEVEDHWYTLV
NPERDPGPVWIHGLTNDVLEGAPLFKDIAEEFATRLDGRVLVAHNAVFDWSMIAREYARA
ERTAPVRQRLCTIALSKELGLPLPNHKLESLAAHFGVVQRNAHHALDDARVLAEAFRPSL
RAAASGGVRLPLLECRPLTEWTDGAARIGRQGSAPSSSSYGGGGTWRPSRKRQPCPYPNP
GRYEPGKRLKQGMRVAFSGDTSVDRELLEDRAVEAGLHIATSLSRLTSVLVTNDPDSYTS
KAVKAKQYGTPVIDEAAFGQLLRDVAPASDG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccagacgaccgccgcgtccgccgctccgtggccggccgcgtatccgcag
ggatacgcggtcgtcgacgtggagaccaccggcctctcccgggacgaccggataatctcc
gcagccgtctaccggctcgacgcgcggggcgaggtcgaggaccactggtacacgctggtc
aaccccgagcgcgacccgggccccgtctggatccacggcctgacgaacgacgtactcgag
ggcgcccccctcttcaaggacatcgccgaggagttcgcgacccggctcgacggccgcgtg
ctcgtcgcccacaacgcggtcttcgactggtcgatgatcgcccgggagtacgcccgcgcg
gagcgcaccgcccccgtccgccagcgcctgtgcaccatcgcgctgtccaaggagctcggc
ctccccctgcccaaccacaagctggagtccctcgccgcgcacttcggcgtcgtccagcgc
aacgcgcaccacgcgctcgacgacgcgcgcgtgctcgccgaggcgttccggccgagcctg
cgggccgccgcgagcggcggggtgcggctgcccctgctcgagtgcaggccgctcacggag
tggacggacggcgcggcgcgcatcggccgccagggctcggccccgtcgtcgtcctcgtac
gggggcggcgggacgtggcgcccgtcgcgcaagcggcagccgtgcccgtacccgaacccc
ggacggtacgaaccgggcaaacgactcaagcagggcatgcgggtggcgttctccggagac
acctcggtggaccgcgaactcctggaggaccgcgccgtcgaggccgggctgcacatcgcg
acgagcctgtcccggctcaccagcgtcctcgtcacgaacgaccccgactcgtacacgtcg
aaggccgtcaaggcgaagcagtacgggacaccggtcatcgacgaggcggccttcgggcag
ctcctgcgggacgtggccccggcgtcagacgggtga
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