KEGG   Streptomyces longhuiensis: LGI35_13435
Entry
LGI35_13435       CDS       T09038                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
slon  Streptomyces longhuiensis
Pathway
slon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LGI35_13435 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slon03400]
    LGI35_13435 (uvrA)
DNA repair and recombination proteins [BR:slon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LGI35_13435 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LGI35_13435 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_21 nSTAND1 AAA_33 AAA_16 AAA_25 AAA_22 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW BCA_ABC_TP_C HC2
Other DBs
NCBI-ProteinID: UDL99202
LinkDB
Position
complement(2866945..2870010)
AA seq 1021 aa
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPISRQSPQAIVDKVLDLPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGQTIQLSEPPTLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIIP
DEDKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPQRAKKALLYGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDSSRERFEGYMREVPCPTCEGTRLK
PIVLAVTVMEKSIAEVSAMSISDCADFLGELKLNARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGPLKELLANAESMTGQYLSGK
KSIPLPDIRRPVDPTRRLTVHGARENNLRDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVAGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
DVHYKGKSIAEVLDMPIEEALGFFEAVPGIARHLRTLNDVGLGYVRLGQSAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLSGLVDKGNSVIVIEHNLDVIK
TADWVVDMGPEGGNGGGLVVAEGTPEEVAAEPSSHTGKFLRDILGADRFSDATVPAARTK
KTVAAKKAAAAKKTVSATAKSPAKKVATAKTTAAGTSATKAAAKKPAAKKTATKSTRARK
A
NT seq 3066 nt   +upstreamnt  +downstreamnt
gtggccgaccgtctcatcgtccgtggcgcgcgcgagcacaatctccgtaacgtctcgctc
gaccttccgcgcgactcgctcatcgtcttcacgggtctgtcggggtccggcaagtcgtcg
ctcgccttcgacacgatcttcgccgaggggcagcggcggtacgtcgagtcgctctcctcg
tacgcacgtcagttcctcggccagatggacaagccggacgtcgacttcatcgagggcctc
tccccggccgtctcgatcgaccagaagtcgacctcgcgcaacccgcgctccacggtcggc
accatcaccgaggtctacgactacctgcgtctgctcttcgcgcgcatcggcaagccgcac
tgtcccgagtgcggccgccccatctcgcgccagtcgccgcaggccatcgtcgacaaggtc
ctcgacctgcccgagggcagccgcttccaggtgctctcgccgctcgtgcgcgagcgcaag
ggcgagttcgtcgacctcttcgccgacctccagaccaagggctacagccgcgcccgggtc
gacggacagacgatccagctgtcggaaccgcccaccctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtgaaggaatccgccaagcgccgtctgaccgac
tccgtggagaccgcgctcggcctgtccggcggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcgcatgtactcggagcacctgtactgcccgtacgac
gacctgtccttcgaggagctcgagccccgctccttctccttcaactcgcccttcggcgcc
tgcccggactgcaccggcatcggcacgcgcatggaggtcgaccccgagctgatcatcccg
gacgaggacaagtccctcgacgagggcgccatccacccctggtcgcacgggcacaccaag
gactacttcgggcgcctcatcggcgccctcgcggacgcgttgggattccggaccgacatc
cccttcgcgggcctgccgcagcgcgccaagaaggccctcctgtacggccacaagacgcag
atcgaggtccgctaccgcaaccggtacggccgcgagcgggtctacacgacccccttcgaa
ggcgccgtcccgttcgtcaagcggcgtcacagcgaggccgagagcgactccagccgtgag
cgcttcgagggctacatgcgcgaggtgccctgccccacctgtgagggcacgcgcctcaag
ccgatcgtcctcgccgtcacggtgatggagaagtcgatcgccgaggtctccgcgatgtcc
atcagcgactgtgcggacttcctgggcgagctgaagctcaacgcgcgcgacaagaagatc
gccgagcgggtcctcaaggaggtcaacgagcggctgcggttcctcgtcgacgtcggcctc
gactacctctcgctcaaccgcgcggccggcaccctctccggtggcgaggcccagcgcatc
cgcctcgccacgcagatcggctccggtctcgtcggcgtgctctacgtcctggacgagccc
tcgatcggcctgcaccagcgcgacaaccaccgcctgatcgagaccctcgtacggctgcgc
gacatgggcaacacgctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgccgac
tgggtcgtcgacatcggccccggcgcgggtgagcacggcggcaaggtcgtccacagcggc
cccttgaaggagctgctcgccaacgcggagtcgatgaccggccagtacctgtcgggcaag
aagtccatcccgctgccggacatccggcgccccgtggacccgacgcgcaggctgaccgtg
cacggcgcccgtgagaacaacctccgcgacatcgacgtgtcgttcccgctcggcgtcctg
accgccgtcaccggtgtctccggttcgggcaagtcgactctggtcaacgacatcctgtac
acgcacctcgcccgcgagctgaacggggcgcggagcgttcccgggcggcacacgcgcgtg
gcgggcgacgacctcgtcgacaaggtcgtgcacgtcgaccagtcgccgatcggccgcacc
ccgcgctcgaacccggcgacgtacaccggagtcttcgaccacgtccgcaagctgttcgcc
gagaccaccgaggcgaaggtccgcggctatctgcccggacgcttctccttcaacgtcaag
ggcggccgctgcgagaactgctccggcgacggcaccatcaagatcgagatgaacttcctg
ccggacgtctacgtcccgtgcgaggtctgccacggagcgcgctacaaccgcgagacgctg
gacgtccactacaagggcaagtccatcgccgaggtcctggacatgcccatcgaggaggcg
ctcggcttcttcgaggcggtcccgggcatcgcccgtcacctgcgcacgctgaacgacgtc
ggcctcgggtacgtccggctcggccagtccgcgccgaccctctccggaggcgaggcccag
cgcgtgaagctggcgagcgagctgcagaagcggtccacgggacgcaccgtctacgtcctc
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctcatcaccgtcctgtcg
ggccttgtcgacaaggggaactcggtgatcgtcatcgagcacaacctcgacgtcatcaag
accgccgactgggtcgtcgacatgggccccgagggcggtaacggcggtggcctcgtcgtc
gccgagggcacccccgaggaggtcgcggccgaaccgtccagtcacaccggcaagttcctg
cgcgacatcctcggcgccgaccggttcagcgacgcgacggtccccgcggcgcgtacgaag
aagacggtggcggccaagaaggccgcggccgcgaagaagaccgtctcggcgacggcgaag
tccccggcgaagaaggtggccacggccaagaccacggcggccgggacgtcggccacgaag
gccgcggcgaagaagccggccgccaagaagaccgcgaccaagtccacgcgggcccgcaag
gcctga

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